Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU88356 |
| length | 306 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G74553 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 31893851 ~ 31901557 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88244 | lncRNA | downstream | 108094 | 31736292 ~ 31785757 (-) | True | G74458 |
| TU88242 | lncRNA | downstream | 137547 | 31753121 ~ 31756304 (-) | True | G74457 |
| TU88243 | lncRNA | downstream | 137547 | 31753121 ~ 31756304 (-) | False | G74457 |
| TU88271 | lncRNA | downstream | 148389 | 31744351 ~ 31745462 (-) | True | G74479 |
| TU88199 | lncRNA | downstream | 243267 | 31567051 ~ 31650584 (-) | True | G74417 |
| XR_004578081.1 | lncRNA | upstream | 7091 | 31908648 ~ 31909914 (-) | False | LOC117597178 |
| XR_004578080.1 | lncRNA | upstream | 7091 | 31908648 ~ 31909914 (-) | False | LOC117597178 |
| XR_004578079.1 | lncRNA | upstream | 7091 | 31908648 ~ 31909914 (-) | True | LOC117597178 |
| XR_004577914.1 | lncRNA | upstream | 210029 | 32111586 ~ 32112411 (-) | True | LOC113540655 |
| TU88436 | lncRNA | upstream | 262497 | 32164054 ~ 32164414 (-) | True | G74619 |
| XM_026935889.2 | mRNA | downstream | 166299 | 31710064 ~ 31727552 (-) | True | nmnat2 |
| XM_034303857.1 | mRNA | downstream | 349217 | 31538539 ~ 31544634 (-) | True | LOC113540064 |
| XM_026936953.2 | mRNA | downstream | 360593 | 31528370 ~ 31533258 (-) | True | psmb5 |
| XM_034304039.1 | mRNA | downstream | 424210 | 31379473 ~ 31469641 (-) | False | LOC113540461 |
| XM_034303863.1 | mRNA | upstream | 922001 | 32823558 ~ 32825567 (-) | True | LOC117597140 |
| XM_034303864.1 | mRNA | upstream | 1071228 | 32972785 ~ 32977700 (-) | True | LOC117597141 |
| XM_026912180.2 | mRNA | upstream | 1229530 | 33131087 ~ 33135775 (-) | False | c4h14orf119 |
| XM_026912181.2 | mRNA | upstream | 1229530 | 33131087 ~ 33135467 (-) | False | c4h14orf119 |
| XM_026912179.2 | mRNA | upstream | 1229530 | 33131087 ~ 33134319 (-) | True | c4h14orf119 |
| LOC117597011 | other | downstream | 10244 | 31882943 ~ 31883607 (-) | True | LOC117597011 |
| TU88353 | other | downstream | 13295 | 31880034 ~ 31880556 (-) | True | G74550 |
| TU88350 | other | downstream | 19024 | 31874309 ~ 31874827 (-) | True | G74547 |
| LOC117597010 | other | downstream | 21977 | 31870518 ~ 31871874 (-) | True | LOC117597010 |
| TU88351 | other | downstream | 22212 | 31871159 ~ 31871639 (-) | False | LOC117597010 |
| LOC117597121 | other | upstream | 4069 | 31905626 ~ 31910974 (-) | True | LOC117597121 |
| LOC117597180 | other | upstream | 29748 | 31931305 ~ 31932063 (-) | True | LOC117597180 |
| TU88423 | other | upstream | 165255 | 32066812 ~ 32067337 (-) | True | G74607 |
| TU88425 | other | upstream | 172826 | 32074383 ~ 32113455 (-) | True | LOC117596957 |
| LOC117596957 | other | upstream | 172831 | 32074388 ~ 32074888 (-) | False | LOC117596957 |
