Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU88457 |
| length | 290 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G74640 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32627561 ~ 32627996 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577913.1 | lncRNA | downstream | 424707 | 32202081 ~ 32202854 (-) | True | LOC117596963 |
| TU88439 | lncRNA | downstream | 426757 | 32200365 ~ 32200804 (-) | True | G74622 |
| TU88436 | lncRNA | downstream | 463147 | 32164054 ~ 32164414 (-) | True | G74619 |
| XR_004577914.1 | lncRNA | downstream | 515150 | 32111586 ~ 32112411 (-) | True | LOC113540655 |
| XR_004578080.1 | lncRNA | downstream | 717647 | 31908648 ~ 31909914 (-) | False | LOC117597178 |
| XR_004577912.1 | lncRNA | upstream | 19285 | 32647281 ~ 32648098 (-) | True | LOC117596962 |
| TU88463 | lncRNA | upstream | 23791 | 32651787 ~ 32652241 (-) | True | G74646 |
| TU88464 | lncRNA | upstream | 31536 | 32659532 ~ 32659961 (-) | True | G74647 |
| XR_004577920.1 | lncRNA | upstream | 139592 | 32767588 ~ 32769282 (-) | True | LOC117596968 |
| XR_004577919.1 | lncRNA | upstream | 221931 | 32849927 ~ 32851375 (-) | True | LOC117596967 |
| XM_026935889.2 | mRNA | downstream | 900009 | 31710064 ~ 31727552 (-) | True | nmnat2 |
| XM_034303857.1 | mRNA | downstream | 1082927 | 31538539 ~ 31544634 (-) | True | LOC113540064 |
| XM_026936953.2 | mRNA | downstream | 1094303 | 31528370 ~ 31533258 (-) | True | psmb5 |
| XM_034304039.1 | mRNA | downstream | 1157920 | 31379473 ~ 31469641 (-) | False | LOC113540461 |
| XM_034303863.1 | mRNA | upstream | 195562 | 32823558 ~ 32825567 (-) | True | LOC117597140 |
| XM_034303864.1 | mRNA | upstream | 344789 | 32972785 ~ 32977700 (-) | True | LOC117597141 |
| XM_026912180.2 | mRNA | upstream | 503091 | 33131087 ~ 33135775 (-) | False | c4h14orf119 |
| XM_026912181.2 | mRNA | upstream | 503091 | 33131087 ~ 33135467 (-) | False | c4h14orf119 |
| XM_026912179.2 | mRNA | upstream | 503091 | 33131087 ~ 33134319 (-) | True | c4h14orf119 |
| TU88440 | other | downstream | 423656 | 32203394 ~ 32203905 (-) | True | LOC117596946 |
| LOC117596946 | other | downstream | 423663 | 32203395 ~ 32203898 (-) | False | LOC117596946 |
| LOC117597125 | other | downstream | 449437 | 32175807 ~ 32178124 (-) | True | LOC117597125 |
| LOC117596948 | other | downstream | 452151 | 32174918 ~ 32175410 (-) | True | LOC117596948 |
| LOC113540132 | other | downstream | 458325 | 32168582 ~ 32169236 (-) | True | LOC113540132 |
| LOC117596950 | other | upstream | 5217 | 32633213 ~ 32633711 (-) | True | LOC117596950 |
| TU88461 | other | upstream | 16028 | 32644024 ~ 32644534 (-) | True | G74644 |
| LOC117597135 | other | upstream | 30365 | 32658361 ~ 32658922 (-) | True | LOC117597135 |
| LOC117596929 | other | upstream | 33896 | 32661892 ~ 32662467 (-) | True | LOC117596929 |
| TU88467 | other | upstream | 33987 | 32661983 ~ 32662476 (-) | False | LOC117596929 |
