Item | Value |
---|---|
RNA id | XM_034303999.1 |
length | 3669 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 2 |
gene id | LOC113539780 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 16310213 ~ 16319166 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU77337 | lncRNA | upstream | 80099 | 16223418 ~ 16231115 (+) | True | G65335 |
TU77172 | lncRNA | upstream | 247753 | 16062088 ~ 16063461 (+) | True | G65199 |
TU77152 | lncRNA | upstream | 256069 | 16019857 ~ 16055145 (+) | True | G65184 |
TU77137 | lncRNA | upstream | 309753 | 16001155 ~ 16001461 (+) | True | G65170 |
TU77079 | lncRNA | upstream | 440443 | 15869198 ~ 15870771 (+) | True | G65115 |
TU77409 | lncRNA | downstream | 72963 | 16392129 ~ 16392363 (+) | True | G65382 |
TU77422 | lncRNA | downstream | 111295 | 16430461 ~ 16430686 (+) | True | G65395 |
TU77544 | lncRNA | downstream | 112779 | 16431945 ~ 16442900 (+) | True | G65495 |
TU77609 | lncRNA | downstream | 195471 | 16514637 ~ 16514841 (+) | True | G65542 |
TU77650 | lncRNA | downstream | 250521 | 16569687 ~ 16577737 (+) | True | G65580 |
XM_034303998.1 | mRNA | upstream | 1057 | 16299941 ~ 16310157 (+) | True | mus81 |
XM_026936115.2 | mRNA | upstream | 12493 | 16291819 ~ 16298721 (+) | True | ovol1a |
XM_034303836.1 | mRNA | upstream | 26930 | 16278990 ~ 16284284 (+) | True | LOC113539958 |
XM_026936367.2 | mRNA | upstream | 33720 | 16264254 ~ 16277494 (+) | True | si:dkey-9k7.3 |
XM_026936368.2 | mRNA | upstream | 47017 | 16256665 ~ 16264197 (+) | True | tkfc |
XM_026936976.2 | mRNA | downstream | 24178 | 16343344 ~ 16349401 (+) | True | fis1 |
XM_026936718.2 | mRNA | downstream | 33595 | 16352761 ~ 16355963 (+) | True | cldn15a |
XM_026936717.2 | mRNA | downstream | 37075 | 16356241 ~ 16366191 (+) | True | dnajc3b |
XM_026937153.2 | mRNA | downstream | 48801 | 16367967 ~ 16370957 (+) | True | LOC113540582 |
XM_026937150.2 | mRNA | downstream | 52831 | 16371997 ~ 16411701 (+) | False | chd3 |
XR_003403994.2 | other | upstream | 271230 | 16023195 ~ 16039984 (+) | False | LOC113540079 |
XR_004578093.1 | other | upstream | 1652278 | 14632030 ~ 14658936 (+) | False | zgc:194930 |
XR_004578085.1 | other | upstream | 2041874 | 14255744 ~ 14269340 (+) | False | brms1 |
XR_004577999.1 | other | upstream | 2591760 | 13705576 ~ 13719454 (+) | False | gc2 |
XR_003404009.2 | other | upstream | 2748948 | 13558623 ~ 13562266 (+) | True | cited1 |
XR_003404046.2 | other | downstream | 48790 | 16367956 ~ 16370684 (+) | False | LOC113540582 |
XR_003404110.1 | other | downstream | 441353 | 16760519 ~ 16760583 (+) | True | LOC113540740 |
XR_003404111.1 | other | downstream | 441583 | 16760749 ~ 16760819 (+) | True | LOC113540741 |
XR_003404115.1 | other | downstream | 441815 | 16760981 ~ 16761107 (+) | True | LOC113540745 |
XR_003404113.1 | other | downstream | 442100 | 16761266 ~ 16761338 (+) | True | LOC113540743 |