Item | Value |
---|---|
RNA id | XM_026935895.2 |
length | 1346 |
RNA type | mRNA |
GC content | 0.41 |
exon number | 7 |
gene id | LOC113539830 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 20091887 ~ 20099077 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU80206 | lncRNA | upstream | 24722 | 20066030 ~ 20067165 (+) | False | dock11 |
TU80207 | lncRNA | upstream | 24849 | 20066030 ~ 20067038 (+) | False | dock11 |
TU80167 | lncRNA | upstream | 125999 | 19962599 ~ 19965888 (+) | True | G67642 |
TU80168 | lncRNA | upstream | 126801 | 19962599 ~ 19965086 (+) | False | G67642 |
TU80111 | lncRNA | upstream | 174718 | 19916600 ~ 19917169 (+) | True | G67595 |
TU80393 | lncRNA | downstream | 150981 | 20250058 ~ 20275675 (+) | True | G67827 |
TU80554 | lncRNA | downstream | 381523 | 20480600 ~ 20481755 (+) | True | G67958 |
TU80678 | lncRNA | downstream | 536271 | 20635348 ~ 20635565 (+) | True | G68054 |
TU80695 | lncRNA | downstream | 593186 | 20692263 ~ 20693053 (+) | False | G68070 |
TU80696 | lncRNA | downstream | 593186 | 20692263 ~ 20693111 (+) | True | G68070 |
XM_026936960.2 | mRNA | upstream | 4582 | 20081770 ~ 20087305 (+) | True | LOC113540456 |
XM_026936959.2 | mRNA | upstream | 16852 | 20069061 ~ 20075035 (+) | True | LOC113540455 |
XM_026937321.2 | mRNA | upstream | 24667 | 19990684 ~ 20067220 (+) | True | dock11 |
XM_026937098.2 | mRNA | downstream | 3404 | 20102481 ~ 20129464 (+) | True | kirrel1a |
XM_026937099.2 | mRNA | downstream | 3405 | 20102482 ~ 20129464 (+) | False | kirrel1a |
XM_026935939.2 | mRNA | downstream | 48747 | 20147824 ~ 20154777 (+) | True | fcer1g |
XM_034303348.1 | mRNA | downstream | 60235 | 20159312 ~ 20166249 (+) | False | hacd4 |
XM_026936479.2 | mRNA | downstream | 60243 | 20159320 ~ 20166249 (+) | True | hacd4 |
trnah-gug_5 | other | upstream | 262997 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
trnah-gug_4 | other | upstream | 263505 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
TU79253 | other | upstream | 1233235 | 18856456 ~ 18858652 (+) | True | G66864 |
TU78855 | other | upstream | 1883323 | 18197312 ~ 18208564 (+) | True | G66492 |
XR_004577948.1 | other | upstream | 1961382 | 18113444 ~ 18130505 (+) | False | frem1a |
trnar-ucu_2 | other | downstream | 1948 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
TU80337 | other | downstream | 48718 | 20147795 ~ 20154771 (+) | False | fcer1g |
trnaa-cgc | other | downstream | 253337 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
TU80896 | other | downstream | 921181 | 21020258 ~ 21033753 (+) | True | G68232 |
XR_003404073.2 | other | downstream | 1228269 | 21327346 ~ 21327420 (+) | True | LOC113540699 |