Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026935898.2 |
| length | 1283 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | si:ch73-335l21.2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13391809 ~ 13394172 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75666 | lncRNA | upstream | 3855 | 13387598 ~ 13387954 (+) | True | G63889 |
| TU75437 | lncRNA | upstream | 105975 | 13284541 ~ 13285834 (+) | False | slc16a13 |
| TU75438 | lncRNA | upstream | 114105 | 13276821 ~ 13277704 (+) | False | slc16a13 |
| XR_004578006.1 | lncRNA | upstream | 124775 | 13259391 ~ 13267034 (+) | False | LOC117597082 |
| TU75440 | lncRNA | upstream | 125330 | 13258874 ~ 13266479 (+) | True | LOC117597082 |
| TU75685 | lncRNA | downstream | 23049 | 13417221 ~ 13417441 (+) | True | G63901 |
| TU75682 | lncRNA | downstream | 65190 | 13459362 ~ 13467726 (+) | True | G63898 |
| TU75739 | lncRNA | downstream | 110288 | 13504460 ~ 13504719 (+) | True | G63936 |
| TU75791 | lncRNA | downstream | 175830 | 13570002 ~ 13572833 (+) | True | G63976 |
| TU75783 | lncRNA | downstream | 301477 | 13695649 ~ 13748072 (+) | False | G63973 |
| XM_026935960.2 | mRNA | upstream | 16759 | 13328033 ~ 13375050 (+) | True | si:ch73-335l21.1 |
| XM_026935961.2 | mRNA | upstream | 16759 | 13328033 ~ 13375050 (+) | False | si:ch73-335l21.1 |
| XM_026935963.2 | mRNA | upstream | 16759 | 13328034 ~ 13375050 (+) | False | si:ch73-335l21.1 |
| XM_026935962.2 | mRNA | upstream | 42266 | 13328033 ~ 13349543 (+) | False | si:ch73-335l21.1 |
| XM_026935975.2 | mRNA | upstream | 64590 | 13311880 ~ 13327219 (+) | True | agfg2 |
| XM_026937145.2 | mRNA | downstream | 5263 | 13399435 ~ 13416861 (+) | True | dvl2 |
| XM_034303680.1 | mRNA | downstream | 26361 | 13420533 ~ 13436596 (+) | True | acadvl |
| XM_026937015.2 | mRNA | downstream | 49622 | 13443794 ~ 13450823 (+) | True | LOC113540489 |
| XM_034303789.1 | mRNA | downstream | 74380 | 13468552 ~ 13475037 (+) | False | LOC113539889 |
| XM_026935990.2 | mRNA | downstream | 74395 | 13468567 ~ 13475037 (+) | True | LOC113539889 |
| TU74787 | other | upstream | 1096686 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| XR_003403980.2 | other | upstream | 1694514 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU73719 | other | upstream | 2728402 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 2826085 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| trnak-cuu_20 | other | upstream | 2860281 | 10531456 ~ 10531528 (+) | True | trnak-cuu_20 |
| TU75687 | other | downstream | 24205 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU75730 | other | downstream | 76597 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| XR_003404009.2 | other | downstream | 164451 | 13558623 ~ 13562266 (+) | True | cited1 |
| XR_004577999.1 | other | downstream | 311404 | 13705576 ~ 13719454 (+) | False | gc2 |
| XR_004578085.1 | other | downstream | 861572 | 14255744 ~ 14269340 (+) | False | brms1 |
