Item | Value |
---|---|
RNA id | XM_026936269.2 |
length | 804 |
RNA type | mRNA |
GC content | 0.38 |
exon number | 5 |
gene id | LOC113540073 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 29554015 ~ 29559125 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU86653 | lncRNA | upstream | 12710 | 29541095 ~ 29541435 (+) | True | G73092 |
TU86650 | lncRNA | upstream | 27227 | 29526202 ~ 29526918 (+) | True | G73089 |
TU86649 | lncRNA | upstream | 29309 | 29524298 ~ 29524836 (+) | True | G73088 |
TU86633 | lncRNA | upstream | 29903 | 29483262 ~ 29524242 (+) | True | G73072 |
TU86683 | lncRNA | downstream | 70468 | 29629593 ~ 29629823 (+) | True | G73118 |
TU86686 | lncRNA | downstream | 114389 | 29673514 ~ 29681141 (+) | False | zgc:153115 |
TU86717 | lncRNA | downstream | 153345 | 29712470 ~ 29712682 (+) | True | G73151 |
TU86720 | lncRNA | downstream | 159337 | 29718462 ~ 29719317 (+) | True | G73154 |
TU86688 | lncRNA | downstream | 162941 | 29722066 ~ 29723750 (+) | True | G73123 |
XM_026936004.2 | mRNA | upstream | 598 | 29541983 ~ 29553547 (+) | True | ccdc39 |
XM_034303967.1 | mRNA | upstream | 14130 | 29534634 ~ 29540015 (+) | True | dcun1d1 |
XM_034303969.1 | mRNA | upstream | 14547 | 29534754 ~ 29539598 (+) | False | dcun1d1 |
XM_034303968.1 | mRNA | upstream | 14547 | 29534755 ~ 29539598 (+) | False | dcun1d1 |
XM_026936996.2 | mRNA | upstream | 40366 | 29500475 ~ 29513779 (+) | False | b3gnt5b |
XM_034303440.1 | mRNA | downstream | 37341 | 29596466 ~ 29602830 (+) | True | LOC113540482 |
XM_034303438.1 | mRNA | downstream | 37341 | 29596466 ~ 29602830 (+) | False | LOC113540482 |
XM_034303441.1 | mRNA | downstream | 37341 | 29596466 ~ 29602830 (+) | False | LOC113540482 |
XM_034303439.1 | mRNA | downstream | 37341 | 29596466 ~ 29602830 (+) | False | LOC113540482 |
XM_034304047.1 | mRNA | downstream | 60986 | 29620111 ~ 29623797 (+) | True | asip2b |
TU86406 | other | upstream | 642041 | 28874356 ~ 28912104 (+) | True | G72873 |
trnat-ugu_8 | other | upstream | 1932762 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
trnat-ugu_6 | other | upstream | 1933468 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
XR_003404070.2 | other | upstream | 1996243 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
XR_003404069.1 | other | upstream | 1997497 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
TU86682 | other | downstream | 60868 | 29619993 ~ 29623037 (+) | False | asip2b |
TU87615 | other | downstream | 1187006 | 30746131 ~ 30767132 (+) | True | G73944 |
TU87616 | other | downstream | 1187006 | 30746131 ~ 30767132 (+) | False | G73944 |
TU87706 | other | downstream | 1502605 | 31061730 ~ 31097888 (+) | False | spsb4a |
TU87898 | other | downstream | 1792136 | 31351261 ~ 31353144 (+) | False | c4h22orf39 |