Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026936294.2 |
| length | 1115 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | LOC113540081 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 16028179 ~ 16030916 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77227 | lncRNA | downstream | 36663 | 15989549 ~ 15991516 (-) | True | smim20 |
| TU77256 | lncRNA | downstream | 45906 | 15981736 ~ 15982273 (-) | True | G65267 |
| TU77240 | lncRNA | downstream | 67812 | 15906094 ~ 15960367 (-) | True | G65253 |
| TU77249 | lncRNA | downstream | 103018 | 15924454 ~ 15925161 (-) | True | G65260 |
| TU76907 | lncRNA | downstream | 826634 | 15201298 ~ 15201545 (-) | True | G64964 |
| XR_003404045.2 | lncRNA | upstream | 162238 | 16193092 ~ 16196596 (-) | True | LOC113540579 |
| TU77434 | lncRNA | upstream | 162238 | 16193092 ~ 16196466 (-) | False | LOC113540579 |
| TU77449 | lncRNA | upstream | 225097 | 16255951 ~ 16260298 (-) | True | G65416 |
| TU77455 | lncRNA | upstream | 232071 | 16262925 ~ 16264165 (-) | True | G65422 |
| TU77456 | lncRNA | upstream | 236382 | 16267236 ~ 16267546 (-) | True | G65423 |
| XM_026936547.2 | mRNA | downstream | 10287 | 16002159 ~ 16017892 (-) | False | tdrd7b |
| XM_026936544.2 | mRNA | downstream | 10287 | 16002159 ~ 16017892 (-) | False | tdrd7b |
| XM_026936545.2 | mRNA | downstream | 10287 | 16002159 ~ 16017892 (-) | False | tdrd7b |
| XM_026936543.2 | mRNA | downstream | 10287 | 16002159 ~ 16017892 (-) | True | tdrd7b |
| XM_034303605.1 | mRNA | downstream | 15503 | 16002159 ~ 16012676 (-) | False | tdrd7b |
| XM_026937123.2 | mRNA | upstream | 23674 | 16054528 ~ 16071692 (-) | True | acox3 |
| XM_026937226.2 | mRNA | upstream | 42933 | 16073787 ~ 16085506 (-) | True | man2b2 |
| XM_026936834.2 | mRNA | upstream | 62069 | 16092923 ~ 16098115 (-) | False | LOC113540382 |
| XM_026936835.2 | mRNA | upstream | 62069 | 16092923 ~ 16098058 (-) | True | LOC113540382 |
| XM_026936353.2 | mRNA | upstream | 89528 | 16120382 ~ 16125010 (-) | True | oxa1l |
| XR_004577994.1 | other | downstream | 36294 | 15973579 ~ 15991885 (-) | False | smim20 |
| XR_004578098.1 | other | downstream | 123824 | 15879471 ~ 15904355 (-) | False | tbc1d19 |
| trnap-ugg_2 | other | downstream | 152281 | 15875827 ~ 15875898 (-) | True | trnap-ugg_2 |
| trnae-cuc_13 | other | downstream | 1293452 | 14734656 ~ 14734727 (-) | True | trnae-cuc_13 |
| TU76338 | other | downstream | 1784498 | 14232809 ~ 14243681 (-) | True | G64436 |
| XR_003404041.2 | other | upstream | 24168 | 16055022 ~ 16071692 (-) | False | acox3 |
| TU77497 | other | upstream | 388456 | 16419310 ~ 16423164 (-) | True | tnfsf12 |
| TU77801 | other | upstream | 573254 | 16604108 ~ 16605717 (-) | False | bmp15 |
| TU78232 | other | upstream | 1369740 | 17400594 ~ 17402464 (-) | True | G66053 |
| TU78241 | other | upstream | 1408639 | 17439493 ~ 17444174 (-) | False | rnaseka |
