Item | Value |
---|---|
RNA id | XM_034303337.1 |
length | 2970 |
RNA type | mRNA |
GC content | 0.48 |
exon number | 9 |
gene id | st6galnac5a |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 28940674 ~ 29042995 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0006486 | protein glycosylation | biological_process |
GO:0097503 | sialylation | biological_process |
GO:0005794 | Golgi apparatus | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
GO:0001665 | alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU86455 | lncRNA | upstream | 10850 | 28933983 ~ 28934309 (+) | True | G72913 |
TU86452 | lncRNA | upstream | 13761 | 28931076 ~ 28931398 (+) | True | G72910 |
TU86429 | lncRNA | upstream | 26761 | 28917742 ~ 28918398 (+) | True | G72892 |
TU86423 | lncRNA | upstream | 29901 | 28914783 ~ 28915258 (+) | False | G72889 |
TU86425 | lncRNA | upstream | 29970 | 28914629 ~ 28915189 (+) | True | G72889 |
TU86462 | lncRNA | downstream | 10491 | 29053486 ~ 29054218 (+) | True | G72917 |
TU86528 | lncRNA | downstream | 138772 | 29181767 ~ 29196118 (+) | False | fubp1 |
TU86551 | lncRNA | downstream | 256140 | 29299135 ~ 29301133 (+) | True | G73000 |
TU86633 | lncRNA | downstream | 440267 | 29483262 ~ 29524242 (+) | True | G73072 |
TU86630 | lncRNA | downstream | 476113 | 29519108 ~ 29521022 (+) | True | G73069 |
XM_026936508.2 | mRNA | upstream | 14627 | 28923611 ~ 28930532 (+) | True | cope |
XM_034303522.1 | mRNA | upstream | 38763 | 28901530 ~ 28906396 (+) | True | LOC117597035 |
XM_034303853.1 | mRNA | upstream | 57603 | 28885151 ~ 28887556 (+) | True | LOC117597120 |
XM_034303521.1 | mRNA | upstream | 76981 | 28863057 ~ 28868178 (+) | True | LOC117597034 |
XM_026936512.2 | mRNA | upstream | 102397 | 28832373 ~ 28842762 (+) | True | txndc12 |
XM_026936490.2 | mRNA | downstream | 37189 | 29080184 ~ 29128564 (+) | True | ak5 |
XM_026936489.2 | mRNA | downstream | 129761 | 29172756 ~ 29184256 (+) | False | miga1 |
XM_026936488.2 | mRNA | downstream | 129761 | 29172756 ~ 29184256 (+) | True | miga1 |
XM_026936485.2 | mRNA | downstream | 142430 | 29185425 ~ 29196149 (+) | True | fubp1 |
XM_034303613.1 | mRNA | downstream | 142430 | 29185425 ~ 29196149 (+) | False | fubp1 |
TU86406 | other | upstream | 33055 | 28874356 ~ 28912104 (+) | True | G72873 |
trnat-ugu_8 | other | upstream | 1323776 | 27621311 ~ 27621383 (+) | True | trnat-ugu_8 |
trnat-ugu_6 | other | upstream | 1324482 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
XR_003404070.2 | other | upstream | 1387257 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
XR_003404069.1 | other | upstream | 1388511 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
TU86682 | other | downstream | 576998 | 29619993 ~ 29623037 (+) | False | asip2b |
TU87615 | other | downstream | 1703136 | 30746131 ~ 30767132 (+) | True | G73944 |
TU87616 | other | downstream | 1703136 | 30746131 ~ 30767132 (+) | False | G73944 |
TU87706 | other | downstream | 2018735 | 31061730 ~ 31097888 (+) | False | spsb4a |
TU87898 | other | downstream | 2308266 | 31351261 ~ 31353144 (+) | False | c4h22orf39 |