Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026936564.2 |
| length | 1232 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 2 |
| gene id | cited1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 13558623 ~ 13562266 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU75739 | lncRNA | upstream | 53904 | 13504460 ~ 13504719 (+) | True | G63936 |
| TU75682 | lncRNA | upstream | 90897 | 13459362 ~ 13467726 (+) | True | G63898 |
| TU75685 | lncRNA | upstream | 141182 | 13417221 ~ 13417441 (+) | True | G63901 |
| TU75666 | lncRNA | upstream | 170669 | 13387598 ~ 13387954 (+) | True | G63889 |
| TU75437 | lncRNA | upstream | 272789 | 13284541 ~ 13285834 (+) | False | slc16a13 |
| TU75791 | lncRNA | downstream | 8465 | 13570002 ~ 13572833 (+) | True | G63976 |
| TU75783 | lncRNA | downstream | 134112 | 13695649 ~ 13748072 (+) | False | G63973 |
| TU75785 | lncRNA | downstream | 134112 | 13695649 ~ 13748072 (+) | True | G63973 |
| TU75843 | lncRNA | downstream | 194007 | 13755544 ~ 13759751 (+) | True | G64025 |
| TU75876 | lncRNA | downstream | 341904 | 13903441 ~ 13909459 (+) | True | G64049 |
| XM_026936560.2 | mRNA | upstream | 4675 | 13533817 ~ 13553948 (+) | True | hdac8 |
| XM_026936562.2 | mRNA | upstream | 4675 | 13534154 ~ 13553948 (+) | False | hdac8 |
| XM_026936951.2 | mRNA | upstream | 57790 | 13486536 ~ 13500833 (+) | True | si:dkey-33c9.6 |
| XM_034303789.1 | mRNA | upstream | 83586 | 13468552 ~ 13475037 (+) | False | LOC113539889 |
| XM_026935990.2 | mRNA | upstream | 83586 | 13468567 ~ 13475037 (+) | True | LOC113539889 |
| XM_026937097.2 | mRNA | downstream | 3191 | 13564728 ~ 13569599 (+) | True | rps4x |
| XM_026936255.2 | mRNA | downstream | 12097 | 13573634 ~ 13645984 (+) | True | nhsl2 |
| XM_026936257.2 | mRNA | downstream | 12098 | 13573635 ~ 13645984 (+) | False | nhsl2 |
| XM_026936258.2 | mRNA | downstream | 22281 | 13583818 ~ 13645984 (+) | False | nhsl2 |
| XM_026936259.2 | mRNA | downstream | 48858 | 13610395 ~ 13645984 (+) | False | nhsl2 |
| TU75730 | other | upstream | 83586 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| TU75687 | other | upstream | 139927 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU74787 | other | upstream | 1263500 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| XR_003403980.2 | other | upstream | 1861328 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU73719 | other | upstream | 2895216 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| XR_004577999.1 | other | downstream | 144039 | 13705576 ~ 13719454 (+) | False | gc2 |
| XR_004578085.1 | other | downstream | 694207 | 14255744 ~ 14269340 (+) | False | brms1 |
| XR_004578093.1 | other | downstream | 1070493 | 14632030 ~ 14658936 (+) | False | zgc:194930 |
| XR_003403994.2 | other | downstream | 2461658 | 16023195 ~ 16039984 (+) | False | LOC113540079 |
| XR_004578074.1 | other | downstream | 2748676 | 16310213 ~ 16319166 (+) | False | LOC113539780 |
