Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026936804.2 |
| length | 1205 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | cideb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 11255938 ~ 11258662 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0042981 | regulation of apoptotic process | biological_process |
| GO:0005811 | lipid droplet | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74145 | lncRNA | upstream | 40195 | 11215155 ~ 11215743 (+) | True | G62554 |
| TU74139 | lncRNA | upstream | 62087 | 11177029 ~ 11193851 (+) | True | G62549 |
| XR_004577937.1 | lncRNA | upstream | 72204 | 11182770 ~ 11183734 (+) | True | LOC117596983 |
| XR_004577928.1 | lncRNA | upstream | 233142 | 11020133 ~ 11022796 (+) | True | LOC113540371 |
| TU74174 | lncRNA | downstream | 16777 | 11275439 ~ 11366783 (+) | True | G62572 |
| TU74196 | lncRNA | downstream | 61435 | 11320097 ~ 11360515 (+) | True | G62585 |
| TU74200 | lncRNA | downstream | 63808 | 11322470 ~ 11325192 (+) | False | LOC117596981 |
| XR_004577934.1 | lncRNA | downstream | 63814 | 11322476 ~ 11325752 (+) | True | LOC117596981 |
| XR_003404022.2 | lncRNA | downstream | 159345 | 11418007 ~ 11421178 (+) | True | LOC113540368 |
| XM_026936802.2 | mRNA | upstream | 11361 | 11240674 ~ 11244577 (+) | True | dhrs4 |
| XM_026936755.2 | mRNA | upstream | 63944 | 11183735 ~ 11191994 (+) | True | ajuba |
| XM_026936767.2 | mRNA | upstream | 84598 | 11159921 ~ 11171340 (+) | True | mmp14a |
| XM_026936763.2 | mRNA | upstream | 118512 | 11130175 ~ 11137426 (+) | True | LOC113540324 |
| XM_034303254.1 | mRNA | upstream | 144844 | 11090981 ~ 11111094 (+) | True | LOC113539896 |
| XM_026936747.2 | mRNA | downstream | 124772 | 11383434 ~ 11400606 (+) | True | si:dkey-183c6.8 |
| XM_034303244.1 | mRNA | downstream | 181426 | 11440088 ~ 11445185 (+) | True | LOC113539902 |
| XM_034303260.1 | mRNA | downstream | 195268 | 11453930 ~ 11462747 (+) | True | LOC117596977 |
| XM_034303231.1 | mRNA | downstream | 209288 | 11467950 ~ 11582422 (+) | False | LOC117596971 |
| XM_034303232.1 | mRNA | downstream | 290938 | 11549600 ~ 11582422 (+) | False | LOC117596971 |
| TU73719 | other | upstream | 592531 | 10657357 ~ 10663407 (+) | True | c4h4orf48 |
| trnak-cuu_21 | other | upstream | 690214 | 10565653 ~ 10565724 (+) | True | trnak-cuu_21 |
| trnak-cuu_20 | other | upstream | 724410 | 10531456 ~ 10531528 (+) | True | trnak-cuu_20 |
| trnan-guu_13 | other | upstream | 724894 | 10530971 ~ 10531044 (+) | True | trnan-guu_13 |
| trnak-cuu_19 | other | upstream | 760468 | 10495398 ~ 10495470 (+) | True | trnak-cuu_19 |
| XR_003403980.2 | other | downstream | 386240 | 11644902 ~ 11697295 (+) | False | si:ch211-200p22.4 |
| TU74787 | other | downstream | 1033852 | 12292514 ~ 12295123 (+) | False | si:dkey-112a7.4 |
| TU75687 | other | downstream | 2159715 | 13418377 ~ 13418696 (+) | True | G63903 |
| TU75730 | other | downstream | 2212107 | 13470769 ~ 13475037 (+) | False | LOC113539889 |
| XR_003404009.2 | other | downstream | 2299961 | 13558623 ~ 13562266 (+) | True | cited1 |
