Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026936934.2 |
| length | 2558 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC113540437 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 28648324 ~ 28652425 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86223 | lncRNA | downstream | 176553 | 28397661 ~ 28471771 (-) | True | G72726 |
| TU86202 | lncRNA | downstream | 264864 | 28343134 ~ 28383460 (-) | True | G72709 |
| TU86215 | lncRNA | downstream | 269192 | 28365657 ~ 28379132 (-) | True | G72720 |
| TU86171 | lncRNA | downstream | 448515 | 28197991 ~ 28199809 (-) | False | LOC117597043 |
| TU86306 | lncRNA | upstream | 14898 | 28667323 ~ 28668643 (-) | True | G72796 |
| XR_004577998.1 | lncRNA | upstream | 60609 | 28713034 ~ 28717955 (-) | True | LOC117597077 |
| TU86345 | lncRNA | upstream | 130498 | 28782923 ~ 28784140 (-) | True | G72824 |
| TU86322 | lncRNA | upstream | 135198 | 28787623 ~ 28791829 (-) | False | LOC117597168 |
| TU86430 | lncRNA | upstream | 179959 | 28832384 ~ 28833720 (-) | True | G72893 |
| XM_034304008.1 | mRNA | downstream | 5929 | 28632754 ~ 28642395 (-) | True | dcaf8 |
| XM_034304007.1 | mRNA | downstream | 5930 | 28632754 ~ 28642394 (-) | False | dcaf8 |
| XM_026936572.2 | mRNA | downstream | 20181 | 28619816 ~ 28628143 (-) | False | LOC113540232 |
| XM_026936569.2 | mRNA | downstream | 20181 | 28619816 ~ 28628143 (-) | True | LOC113540232 |
| XM_026936570.2 | mRNA | downstream | 20251 | 28619816 ~ 28628073 (-) | False | LOC113540232 |
| XM_034304106.1 | mRNA | upstream | 16554 | 28668979 ~ 28680704 (-) | True | scp2a |
| XM_026937186.2 | mRNA | upstream | 30047 | 28682472 ~ 28685576 (-) | True | czib |
| XM_026937185.2 | mRNA | upstream | 34131 | 28686556 ~ 28690012 (-) | True | uck2b |
| XM_026936878.2 | mRNA | upstream | 47244 | 28699669 ~ 28706523 (-) | True | zte38 |
| XM_026936341.2 | mRNA | upstream | 55604 | 28708029 ~ 28711708 (-) | True | prdx1 |
| trnas-uga_2 | other | downstream | 411519 | 28236724 ~ 28236805 (-) | True | trnas-uga_2 |
| trnas-uga_1 | other | downstream | 412057 | 28236186 ~ 28236267 (-) | True | trnas-uga_1 |
| XR_003404039.2 | other | downstream | 606539 | 28016064 ~ 28041785 (-) | False | prkag2b |
| trnat-ugu_9 | other | downstream | 1023516 | 27624736 ~ 27624808 (-) | True | trnat-ugu_9 |
| trnat-ugu_7 | other | downstream | 1027196 | 27621056 ~ 27621128 (-) | True | trnat-ugu_7 |
| XR_004577984.1 | other | upstream | 221153 | 28873578 ~ 28882164 (-) | True | LOC117597037 |
| XR_004577982.1 | other | upstream | 221155 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | upstream | 229902 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| TU86878 | other | upstream | 496213 | 29148638 ~ 29152381 (-) | False | usp33 |
| XR_003404076.1 | other | upstream | 870969 | 29523394 ~ 29523466 (-) | True | LOC113540702 |
