Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026936960.2 |
| length | 897 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 6 |
| gene id | LOC113540456 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 20081770 ~ 20087305 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80206 | lncRNA | upstream | 14605 | 20066030 ~ 20067165 (+) | False | dock11 |
| TU80207 | lncRNA | upstream | 14732 | 20066030 ~ 20067038 (+) | False | dock11 |
| TU80167 | lncRNA | upstream | 115882 | 19962599 ~ 19965888 (+) | True | G67642 |
| TU80168 | lncRNA | upstream | 116684 | 19962599 ~ 19965086 (+) | False | G67642 |
| TU80111 | lncRNA | upstream | 164601 | 19916600 ~ 19917169 (+) | True | G67595 |
| TU80393 | lncRNA | downstream | 162753 | 20250058 ~ 20275675 (+) | True | G67827 |
| TU80554 | lncRNA | downstream | 393295 | 20480600 ~ 20481755 (+) | True | G67958 |
| TU80678 | lncRNA | downstream | 548043 | 20635348 ~ 20635565 (+) | True | G68054 |
| TU80695 | lncRNA | downstream | 604958 | 20692263 ~ 20693053 (+) | False | G68070 |
| TU80696 | lncRNA | downstream | 604958 | 20692263 ~ 20693111 (+) | True | G68070 |
| XM_026936959.2 | mRNA | upstream | 6735 | 20069061 ~ 20075035 (+) | True | LOC113540455 |
| XM_026937321.2 | mRNA | upstream | 14550 | 19990684 ~ 20067220 (+) | True | dock11 |
| XM_034303517.1 | mRNA | upstream | 14550 | 19990684 ~ 20067220 (+) | False | dock11 |
| XM_026937322.2 | mRNA | upstream | 14550 | 19990684 ~ 20067220 (+) | False | dock11 |
| XM_026937323.2 | mRNA | upstream | 16078 | 19990684 ~ 20065692 (+) | False | dock11 |
| XM_026935895.2 | mRNA | downstream | 4582 | 20091887 ~ 20099077 (+) | True | LOC113539830 |
| XM_026937098.2 | mRNA | downstream | 15176 | 20102481 ~ 20129464 (+) | True | kirrel1a |
| XM_026937099.2 | mRNA | downstream | 15177 | 20102482 ~ 20129464 (+) | False | kirrel1a |
| XM_026935939.2 | mRNA | downstream | 60519 | 20147824 ~ 20154777 (+) | True | fcer1g |
| XM_034303348.1 | mRNA | downstream | 72007 | 20159312 ~ 20166249 (+) | False | hacd4 |
| trnah-gug_5 | other | upstream | 252880 | 19828819 ~ 19828890 (+) | True | trnah-gug_5 |
| trnah-gug_4 | other | upstream | 253388 | 19828311 ~ 19828382 (+) | True | trnah-gug_4 |
| TU79253 | other | upstream | 1223118 | 18856456 ~ 18858652 (+) | True | G66864 |
| TU78855 | other | upstream | 1873206 | 18197312 ~ 18208564 (+) | True | G66492 |
| XR_004577948.1 | other | upstream | 1951265 | 18113444 ~ 18130505 (+) | False | frem1a |
| trnar-ucu_2 | other | downstream | 13720 | 20101025 ~ 20101098 (+) | True | trnar-ucu_2 |
| TU80337 | other | downstream | 60490 | 20147795 ~ 20154771 (+) | False | fcer1g |
| trnaa-cgc | other | downstream | 265109 | 20352414 ~ 20352485 (+) | True | trnaa-cgc |
| TU80896 | other | downstream | 932953 | 21020258 ~ 21033753 (+) | True | G68232 |
| XR_003404073.2 | other | downstream | 1240041 | 21327346 ~ 21327420 (+) | True | LOC113540699 |
