Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404046.2 |
| length | 952 |
| RNA type | misc_RNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | LOC113540582 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 16367956 ~ 16370957 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77337 | lncRNA | upstream | 136841 | 16223418 ~ 16231115 (+) | True | G65335 |
| TU77172 | lncRNA | upstream | 304495 | 16062088 ~ 16063461 (+) | True | G65199 |
| TU77152 | lncRNA | upstream | 312811 | 16019857 ~ 16055145 (+) | True | G65184 |
| TU77137 | lncRNA | upstream | 366495 | 16001155 ~ 16001461 (+) | True | G65170 |
| TU77079 | lncRNA | upstream | 497185 | 15869198 ~ 15870771 (+) | True | G65115 |
| TU77409 | lncRNA | downstream | 21445 | 16392129 ~ 16392363 (+) | True | G65382 |
| TU77422 | lncRNA | downstream | 59777 | 16430461 ~ 16430686 (+) | True | G65395 |
| TU77544 | lncRNA | downstream | 61261 | 16431945 ~ 16442900 (+) | True | G65495 |
| TU77609 | lncRNA | downstream | 143953 | 16514637 ~ 16514841 (+) | True | G65542 |
| TU77650 | lncRNA | downstream | 199003 | 16569687 ~ 16577737 (+) | True | G65580 |
| XM_026936717.2 | mRNA | upstream | 1765 | 16356241 ~ 16366191 (+) | True | dnajc3b |
| XM_026936718.2 | mRNA | upstream | 11993 | 16352761 ~ 16355963 (+) | True | cldn15a |
| XM_026936976.2 | mRNA | upstream | 18555 | 16343344 ~ 16349401 (+) | True | fis1 |
| XM_026935826.2 | mRNA | upstream | 48790 | 16310213 ~ 16319166 (+) | True | LOC113539780 |
| XM_034303999.1 | mRNA | upstream | 48790 | 16311214 ~ 16319166 (+) | False | LOC113539780 |
| XM_026937150.2 | mRNA | downstream | 1313 | 16371997 ~ 16411701 (+) | False | chd3 |
| XM_026937149.2 | mRNA | downstream | 1317 | 16372001 ~ 16411701 (+) | False | chd3 |
| XM_026937151.2 | mRNA | downstream | 1323 | 16372007 ~ 16418930 (+) | True | chd3 |
| XM_026937152.2 | mRNA | downstream | 4254 | 16374938 ~ 16411701 (+) | False | chd3 |
| XM_026937342.2 | mRNA | downstream | 89907 | 16460591 ~ 16465228 (+) | True | si:dkey-19b23.8 |
| XR_004578074.1 | other | upstream | 48790 | 16310213 ~ 16319166 (+) | False | LOC113539780 |
| XR_003403994.2 | other | upstream | 327972 | 16023195 ~ 16039984 (+) | False | LOC113540079 |
| XR_004578093.1 | other | upstream | 1709020 | 14632030 ~ 14658936 (+) | False | zgc:194930 |
| XR_004578085.1 | other | upstream | 2098616 | 14255744 ~ 14269340 (+) | False | brms1 |
| XR_004577999.1 | other | upstream | 2648502 | 13705576 ~ 13719454 (+) | False | gc2 |
| XR_003404110.1 | other | downstream | 389835 | 16760519 ~ 16760583 (+) | True | LOC113540740 |
| XR_003404111.1 | other | downstream | 390065 | 16760749 ~ 16760819 (+) | True | LOC113540741 |
| XR_003404115.1 | other | downstream | 390297 | 16760981 ~ 16761107 (+) | True | LOC113540745 |
| XR_003404113.1 | other | downstream | 390582 | 16761266 ~ 16761338 (+) | True | LOC113540743 |
| XR_003404114.1 | other | downstream | 390888 | 16761572 ~ 16761647 (+) | True | LOC113540744 |
