Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026937255.2 |
| length | 383 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 3 |
| gene id | LOC113540659 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 26808656 ~ 26810250 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0065008 | regulation of biological quality | biological_process |
| GO:0048583 | regulation of response to stimulus | biological_process |
| GO:0031667 | response to nutrient levels | biological_process |
| GO:0007165 | signal transduction | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU84994 | lncRNA | downstream | 111559 | 26696893 ~ 26697097 (-) | True | G71707 |
| TU84992 | lncRNA | downstream | 112335 | 26694946 ~ 26696321 (-) | True | G71705 |
| TU84990 | lncRNA | downstream | 118262 | 26689070 ~ 26690394 (-) | True | G71704 |
| TU84986 | lncRNA | downstream | 136811 | 26671641 ~ 26671845 (-) | True | G71700 |
| TU84985 | lncRNA | downstream | 137120 | 26671260 ~ 26671536 (-) | True | G71699 |
| TU85024 | lncRNA | upstream | 37096 | 26847346 ~ 26859455 (-) | True | G71734 |
| TU85022 | lncRNA | upstream | 43017 | 26853267 ~ 26856672 (-) | True | G71732 |
| TU85065 | lncRNA | upstream | 84431 | 26894681 ~ 26895564 (-) | True | G71764 |
| TU85066 | lncRNA | upstream | 124740 | 26934990 ~ 26935197 (-) | True | G71765 |
| TU85140 | lncRNA | upstream | 221067 | 27031317 ~ 27036462 (-) | True | G71815 |
| XM_034304027.1 | mRNA | downstream | 3289 | 26792023 ~ 26805367 (-) | False | map1sb |
| XM_026936912.2 | mRNA | downstream | 3289 | 26792023 ~ 26805367 (-) | True | map1sb |
| XM_026935911.2 | mRNA | downstream | 17742 | 26787087 ~ 26790914 (-) | True | pex19 |
| XM_034303683.1 | mRNA | downstream | 22138 | 26770582 ~ 26786518 (-) | True | copa |
| XM_026936093.2 | mRNA | downstream | 96352 | 26708082 ~ 26712304 (-) | True | slitrk3b |
| XM_034303851.1 | mRNA | upstream | 24775 | 26835025 ~ 26835888 (-) | True | LOC117597119 |
| XM_034303326.1 | mRNA | upstream | 25396 | 26835646 ~ 26845018 (-) | False | samd7 |
| XM_034303325.1 | mRNA | upstream | 25396 | 26835646 ~ 26843973 (-) | False | samd7 |
| XM_034303324.1 | mRNA | upstream | 25396 | 26835646 ~ 26843282 (-) | False | samd7 |
| XM_026936549.2 | mRNA | upstream | 25396 | 26835646 ~ 26843169 (-) | True | samd7 |
| TU84853 | other | downstream | 257626 | 26472080 ~ 26551030 (-) | False | G71596 |
| TU84852 | other | downstream | 257626 | 26537102 ~ 26551030 (-) | False | G71596 |
| TU84653 | other | downstream | 432568 | 26373758 ~ 26376088 (-) | False | ltb4r2b |
| TU83344 | other | downstream | 2503730 | 24304374 ~ 24304926 (-) | True | G70255 |
| XR_003404116.1 | other | downstream | 2771802 | 24036718 ~ 24036854 (-) | True | LOC113540746 |
| TU85159 | other | upstream | 286352 | 27096602 ~ 27100858 (-) | True | G71832 |
| TU85245 | other | upstream | 393533 | 27203783 ~ 27204186 (-) | True | G71909 |
| trnat-ugu_3 | other | upstream | 585107 | 27395357 ~ 27395429 (-) | True | trnat-ugu_3 |
| trnat-ugu_4 | other | upstream | 585901 | 27396151 ~ 27396223 (-) | True | trnat-ugu_4 |
| XR_003404034.2 | other | upstream | 618170 | 27428420 ~ 27432678 (-) | False | LOC113540508 |
