Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303276.1 |
| length | 1010 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 7 |
| gene id | ccdc166 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 11377829 ~ 11381919 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74374 | lncRNA | downstream | 11648 | 11365255 ~ 11366181 (-) | True | G62735 |
| TU74393 | lncRNA | downstream | 16400 | 11321370 ~ 11361429 (-) | True | G62754 |
| TU74367 | lncRNA | downstream | 17785 | 11272200 ~ 11360044 (-) | False | LOC113540328 |
| XR_004577938.1 | lncRNA | downstream | 19275 | 11350697 ~ 11358554 (-) | True | LOC117596984 |
| TU74382 | lncRNA | downstream | 31870 | 11312414 ~ 11345959 (-) | True | G62743 |
| TU74413 | lncRNA | upstream | 20350 | 11402269 ~ 11403021 (-) | False | si:dkey-183c6.7 |
| TU74373 | lncRNA | upstream | 59198 | 11441117 ~ 11471047 (-) | True | G62734 |
| TU74432 | lncRNA | upstream | 69519 | 11451438 ~ 11547288 (-) | True | G62791 |
| XR_004577935.1 | lncRNA | upstream | 78151 | 11460070 ~ 11463038 (-) | False | LOC117596982 |
| XR_004577936.1 | lncRNA | upstream | 78151 | 11460070 ~ 11463038 (-) | True | LOC117596982 |
| XM_026933044.2 | mRNA | downstream | 30241 | 11342706 ~ 11347588 (-) | True | LOC113538167 |
| XM_034303832.1 | mRNA | downstream | 36646 | 11320035 ~ 11341183 (-) | True | LOC117597109 |
| XM_034303258.1 | mRNA | downstream | 65959 | 11286449 ~ 11311870 (-) | True | LOC113538166 |
| XM_034303257.1 | mRNA | downstream | 67036 | 11286449 ~ 11310793 (-) | False | LOC113538166 |
| XM_034303259.1 | mRNA | downstream | 67080 | 11286449 ~ 11310749 (-) | False | LOC113538166 |
| XM_026936784.2 | mRNA | upstream | 20108 | 11402027 ~ 11415897 (-) | True | si:dkey-183c6.7 |
| XM_026936779.2 | mRNA | upstream | 44379 | 11426298 ~ 11432252 (-) | False | syt4 |
| XM_026936778.2 | mRNA | upstream | 44379 | 11426298 ~ 11432252 (-) | True | syt4 |
| XM_034303241.1 | mRNA | upstream | 127812 | 11509731 ~ 11519651 (-) | False | LOC113540344 |
| XM_034303239.1 | mRNA | upstream | 127812 | 11509731 ~ 11518925 (-) | True | LOC113540344 |
| XR_003404120.1 | other | downstream | 163407 | 11214322 ~ 11214422 (-) | True | LOC113540752 |
| XR_003404119.1 | other | downstream | 164895 | 11212834 ~ 11212934 (-) | True | LOC113540751 |
| XR_003404121.1 | other | downstream | 168996 | 11208733 ~ 11208833 (-) | True | LOC113540753 |
| TU74341 | other | downstream | 195516 | 11177711 ~ 11182313 (-) | False | mrpl52 |
| TU73964 | other | downstream | 467830 | 10907127 ~ 10909999 (-) | False | nedd8 |
| TU74378 | other | upstream | 151845 | 11533764 ~ 11535013 (-) | False | LOC117597110 |
| TU74889 | other | upstream | 865355 | 12247274 ~ 12249056 (-) | False | si:dkey-165a24.9 |
| TU74900 | other | upstream | 890299 | 12272218 ~ 12277612 (-) | True | LOC113539775 |
| TU74899 | other | upstream | 890453 | 12272372 ~ 12277612 (-) | False | LOC113539775 |
| TU74901 | other | upstream | 890453 | 12272372 ~ 12277669 (-) | False | LOC113539775 |
