Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303280.1 |
| length | 1174 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | msmp |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 10569552 ~ 10574841 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU73657 | lncRNA | downstream | 30963 | 10538298 ~ 10538589 (-) | False | gba2 |
| TU73654 | lncRNA | downstream | 35130 | 10534073 ~ 10534422 (-) | True | G62167 |
| XR_004577943.1 | lncRNA | downstream | 70465 | 10497521 ~ 10499087 (-) | True | LOC117596989 |
| TU73609 | lncRNA | downstream | 85624 | 10474770 ~ 10483928 (-) | True | G62125 |
| TU73582 | lncRNA | downstream | 198989 | 10368321 ~ 10370563 (-) | True | G62109 |
| TU74041 | lncRNA | upstream | 351999 | 10926840 ~ 10953744 (-) | True | G62469 |
| TU74080 | lncRNA | upstream | 467504 | 11042345 ~ 11074703 (-) | True | G62504 |
| XR_004577933.1 | lncRNA | upstream | 505690 | 11080531 ~ 11083012 (-) | True | LOC117596980 |
| TU74367 | lncRNA | upstream | 697359 | 11272200 ~ 11360044 (-) | False | LOC113540328 |
| TU74365 | lncRNA | upstream | 736732 | 11311573 ~ 11313616 (-) | False | LOC113538166 |
| XM_026936746.2 | mRNA | downstream | 7546 | 10538245 ~ 10562006 (-) | True | gba2 |
| XM_026936810.2 | mRNA | downstream | 95411 | 10460219 ~ 10474141 (-) | False | c4h20orf27 |
| XM_034303277.1 | mRNA | downstream | 95554 | 10460219 ~ 10473998 (-) | False | c4h20orf27 |
| XM_026936807.2 | mRNA | downstream | 95882 | 10460219 ~ 10473670 (-) | False | c4h20orf27 |
| XM_026936808.2 | mRNA | downstream | 95903 | 10460219 ~ 10473649 (-) | True | c4h20orf27 |
| XM_026936780.2 | mRNA | upstream | 20852 | 10595693 ~ 10601685 (-) | False | si:dkeyp-75h12.7 |
| XM_034303263.1 | mRNA | upstream | 20852 | 10595693 ~ 10601629 (-) | True | si:dkeyp-75h12.7 |
| XM_034303222.1 | mRNA | upstream | 26996 | 10601837 ~ 10631020 (-) | False | tesk1 |
| XM_034303223.1 | mRNA | upstream | 26996 | 10601837 ~ 10631020 (-) | True | tesk1 |
| XM_026936769.2 | mRNA | upstream | 71810 | 10646651 ~ 10658141 (-) | False | nelfa |
| trnan-guu_12 | other | downstream | 74314 | 10495165 ~ 10495238 (-) | True | trnan-guu_12 |
| trnan-guu_11 | other | downstream | 77889 | 10491590 ~ 10491663 (-) | True | trnan-guu_11 |
| trnan-guu_10 | other | downstream | 79131 | 10490348 ~ 10490421 (-) | True | trnan-guu_10 |
| trnan-guu_9 | other | downstream | 82811 | 10486668 ~ 10486741 (-) | True | trnan-guu_9 |
| trnan-guu_8 | other | downstream | 84040 | 10485439 ~ 10485512 (-) | True | trnan-guu_8 |
| XR_004577925.1 | other | upstream | 119288 | 10694129 ~ 10747646 (-) | False | poln |
| XR_004577926.1 | other | upstream | 131169 | 10706010 ~ 10747646 (-) | False | poln |
| XR_004577924.1 | other | upstream | 201919 | 10776760 ~ 10863498 (-) | False | svep1 |
| XR_004577923.1 | other | upstream | 206381 | 10781222 ~ 10863498 (-) | False | svep1 |
| TU73964 | other | upstream | 332286 | 10907127 ~ 10909999 (-) | False | nedd8 |
