Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303606.1 |
| length | 510 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | LOC117597065 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 6778356 ~ 6779988 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71581 | lncRNA | downstream | 136171 | 6641971 ~ 6642185 (-) | True | G60503 |
| XR_004578003.1 | lncRNA | downstream | 176130 | 6587543 ~ 6602226 (-) | False | LOC113547257 |
| XR_004578002.1 | lncRNA | downstream | 176130 | 6588011 ~ 6602226 (-) | True | LOC113547257 |
| TU71370 | lncRNA | downstream | 383285 | 6394865 ~ 6395071 (-) | True | G60333 |
| TU71365 | lncRNA | downstream | 388279 | 6389703 ~ 6390077 (-) | True | G60328 |
| TU71799 | lncRNA | upstream | 5339 | 6785327 ~ 6792952 (-) | True | G60672 |
| TU71790 | lncRNA | upstream | 98656 | 6878644 ~ 6881335 (-) | True | G60669 |
| TU71867 | lncRNA | upstream | 450666 | 7230654 ~ 7230904 (-) | True | G60727 |
| TU71866 | lncRNA | upstream | 462137 | 7242125 ~ 7246436 (-) | True | G60726 |
| TU72009 | lncRNA | upstream | 661274 | 7441262 ~ 7538818 (-) | True | G60846 |
| XM_034304050.1 | mRNA | downstream | 316 | 6775979 ~ 6778040 (-) | True | LOC117597185 |
| XM_026947504.2 | mRNA | downstream | 165514 | 6602800 ~ 6612842 (-) | True | LOC113547256 |
| XM_034303938.1 | mRNA | downstream | 247136 | 6518463 ~ 6531220 (-) | False | mylk4a |
| XM_034303607.1 | mRNA | upstream | 7 | 6779995 ~ 6789815 (-) | True | LOC117597066 |
| XM_034303608.1 | mRNA | upstream | 15097 | 6795085 ~ 6798486 (-) | True | LOC117597067 |
| XM_034303462.1 | mRNA | upstream | 30141 | 6810129 ~ 6812432 (-) | True | LOC117597003 |
| XM_034303457.1 | mRNA | upstream | 57491 | 6837479 ~ 6868065 (-) | True | LOC117597000 |
| XM_034303456.1 | mRNA | upstream | 57491 | 6837479 ~ 6848841 (-) | False | LOC117597000 |
| trnae-cuc_12 | other | downstream | 334541 | 6443744 ~ 6443815 (-) | True | trnae-cuc_12 |
| trnak-cuu_3 | other | downstream | 597397 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |
| TU71184 | other | downstream | 818811 | 5900249 ~ 5959545 (-) | False | G60166 |
| TU71182 | other | downstream | 848157 | 5900249 ~ 5930199 (-) | True | G60166 |
| TU70820 | other | downstream | 1292559 | 5478542 ~ 5485797 (-) | False | cldn1 |
| TU71817 | other | upstream | 102481 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
| XR_004578041.1 | other | upstream | 1795518 | 8575506 ~ 8578850 (-) | False | LOC113526753 |
| TU72820 | other | upstream | 2203246 | 8983234 ~ 8984453 (-) | True | G61478 |
| XR_003403995.2 | other | upstream | 2534861 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| TU72884 | other | upstream | 2557838 | 9337826 ~ 9338745 (-) | True | G61537 |
