Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303827.1 |
| length | 1343 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 9 |
| gene id | LOC117597105 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 10111162 ~ 10143429 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K06712 | BTN, CD277; butyrophilin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU73517 | lncRNA | downstream | 30945 | 10078927 ~ 10080217 (-) | False | LOC113540372 |
| TU73473 | lncRNA | downstream | 37969 | 10070406 ~ 10073193 (-) | True | cxcl19 |
| XR_003404074.2 | lncRNA | downstream | 69383 | 10041567 ~ 10041779 (-) | True | LOC113540700 |
| XR_004578135.1 | lncRNA | downstream | 70468 | 10040482 ~ 10040694 (-) | True | LOC117597227 |
| XR_003404083.2 | lncRNA | downstream | 71575 | 10039380 ~ 10039587 (-) | True | LOC113540709 |
| XR_004577927.1 | lncRNA | upstream | 58802 | 10202231 ~ 10211232 (-) | True | LOC113540369 |
| TU73581 | lncRNA | upstream | 220583 | 10364012 ~ 10364892 (-) | True | G62108 |
| TU73582 | lncRNA | upstream | 224892 | 10368321 ~ 10370563 (-) | True | G62109 |
| TU73609 | lncRNA | upstream | 331341 | 10474770 ~ 10483928 (-) | True | G62125 |
| XR_004577943.1 | lncRNA | upstream | 354092 | 10497521 ~ 10499087 (-) | True | LOC117596989 |
| XM_026936742.2 | mRNA | downstream | 4633 | 10095779 ~ 10106529 (-) | True | LOC113540311 |
| XM_026936816.2 | mRNA | downstream | 16046 | 10093747 ~ 10095116 (-) | True | LOC113540363 |
| XM_034303281.1 | mRNA | downstream | 30925 | 10078688 ~ 10080237 (-) | True | LOC113540372 |
| XM_026936815.2 | mRNA | downstream | 37933 | 10070816 ~ 10073229 (-) | False | cxcl19 |
| XM_034303270.1 | mRNA | downstream | 57948 | 10046572 ~ 10053214 (-) | False | trmt10b |
| XM_034303249.1 | mRNA | upstream | 24488 | 10167917 ~ 10189928 (-) | True | LOC113538503 |
| XM_034303829.1 | mRNA | upstream | 88245 | 10231674 ~ 10236612 (-) | True | LOC113547269 |
| XM_034303275.1 | mRNA | upstream | 165222 | 10308651 ~ 10320200 (-) | True | LOC117596978 |
| XM_026936775.2 | mRNA | upstream | 190040 | 10333469 ~ 10344131 (-) | False | LOC113540334 |
| XM_034303264.1 | mRNA | upstream | 190040 | 10333469 ~ 10344131 (-) | True | LOC113540334 |
| TU73337 | other | downstream | 73587 | 10027987 ~ 10037575 (-) | False | G61900 |
| TU73432 | other | downstream | 305844 | 9776278 ~ 9805318 (-) | True | G61972 |
| TU73323 | other | downstream | 582359 | 9526574 ~ 9528803 (-) | False | LOC113526752 |
| TU72884 | other | downstream | 772417 | 9337826 ~ 9338745 (-) | True | G61537 |
| XR_003403995.2 | other | downstream | 783731 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| trnan-guu | other | upstream | 330967 | 10474396 ~ 10474470 (-) | True | trnan-guu |
| trnan-guu_1 | other | upstream | 332194 | 10475623 ~ 10475696 (-) | True | trnan-guu_1 |
| trnan-guu_2 | other | upstream | 333429 | 10476858 ~ 10476930 (-) | True | trnan-guu_2 |
| trnan-guu_3 | other | upstream | 335870 | 10479299 ~ 10479372 (-) | True | trnan-guu_3 |
| trnan-guu_4 | other | upstream | 337088 | 10480517 ~ 10480591 (-) | True | trnan-guu_4 |
