Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303863.1 |
| length | 942 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC117597140 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32823558 ~ 32825567 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004577920.1 | lncRNA | downstream | 54276 | 32767588 ~ 32769282 (-) | True | LOC117596968 |
| TU88464 | lncRNA | downstream | 163597 | 32659532 ~ 32659961 (-) | True | G74647 |
| TU88463 | lncRNA | downstream | 171317 | 32651787 ~ 32652241 (-) | True | G74646 |
| XR_004577912.1 | lncRNA | downstream | 175460 | 32647281 ~ 32648098 (-) | True | LOC117596962 |
| TU88457 | lncRNA | downstream | 195562 | 32627561 ~ 32627996 (-) | True | G74640 |
| XR_004577919.1 | lncRNA | upstream | 24360 | 32849927 ~ 32851375 (-) | True | LOC117596967 |
| TU88526 | lncRNA | upstream | 36640 | 32862207 ~ 32862659 (-) | True | G74702 |
| XR_004577918.1 | lncRNA | upstream | 46179 | 32871746 ~ 32873023 (-) | True | LOC117596966 |
| XR_004578073.1 | lncRNA | upstream | 120567 | 32946134 ~ 32947158 (-) | True | LOC117597171 |
| TU88542 | lncRNA | upstream | 199854 | 33025421 ~ 33025846 (-) | True | G74717 |
| XM_026935889.2 | mRNA | downstream | 1096006 | 31710064 ~ 31727552 (-) | True | nmnat2 |
| XM_034303857.1 | mRNA | downstream | 1278924 | 31538539 ~ 31544634 (-) | True | LOC113540064 |
| XM_026936953.2 | mRNA | downstream | 1290300 | 31528370 ~ 31533258 (-) | True | psmb5 |
| XM_026936967.2 | mRNA | downstream | 1321180 | 31379473 ~ 31502378 (-) | True | LOC113540461 |
| XM_034303864.1 | mRNA | upstream | 147218 | 32972785 ~ 32977700 (-) | True | LOC117597141 |
| XM_026912180.2 | mRNA | upstream | 305520 | 33131087 ~ 33135775 (-) | False | c4h14orf119 |
| XM_026912181.2 | mRNA | upstream | 305520 | 33131087 ~ 33135467 (-) | False | c4h14orf119 |
| XM_026912179.2 | mRNA | upstream | 305520 | 33131087 ~ 33134319 (-) | True | c4h14orf119 |
| XM_026912175.2 | mRNA | upstream | 340375 | 33165942 ~ 33168027 (-) | False | cbln12 |
| LOC113540133 | other | downstream | 7277 | 32815429 ~ 32816281 (-) | True | LOC113540133 |
| LOC117597139 | other | downstream | 11823 | 32810432 ~ 32811735 (-) | True | LOC117597139 |
| LOC117596923 | other | downstream | 13262 | 32809596 ~ 32810296 (-) | True | LOC117596923 |
| LOC117596938 | other | downstream | 19336 | 32803554 ~ 32804222 (-) | True | LOC117596938 |
| LOC117596927 | other | downstream | 45760 | 32776966 ~ 32777798 (-) | True | LOC117596927 |
| LOC117596924 | other | upstream | 9472 | 32835039 ~ 32835722 (-) | True | LOC117596924 |
| LOC117596934 | other | upstream | 18534 | 32844101 ~ 32845270 (-) | True | LOC117596934 |
| TU88527 | other | upstream | 40379 | 32865946 ~ 32866461 (-) | True | G74703 |
| TU88528 | other | upstream | 40379 | 32865946 ~ 32868466 (-) | False | G74703 |
| TU88533 | other | upstream | 120614 | 32946181 ~ 32946800 (-) | False | LOC117597171 |
