Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034303864.1 |
| length | 876 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC117597141 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32972785 ~ 32977700 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578073.1 | lncRNA | downstream | 25627 | 32946134 ~ 32947158 (-) | True | LOC117597171 |
| XR_004577918.1 | lncRNA | downstream | 99762 | 32871746 ~ 32873023 (-) | True | LOC117596966 |
| TU88526 | lncRNA | downstream | 110126 | 32862207 ~ 32862659 (-) | True | G74702 |
| XR_004577919.1 | lncRNA | downstream | 121410 | 32849927 ~ 32851375 (-) | True | LOC117596967 |
| XR_004577920.1 | lncRNA | downstream | 203503 | 32767588 ~ 32769282 (-) | True | LOC117596968 |
| TU88542 | lncRNA | upstream | 47721 | 33025421 ~ 33025846 (-) | True | G74717 |
| TU88545 | lncRNA | upstream | 53342 | 33031042 ~ 33031426 (-) | True | G74720 |
| TU88554 | lncRNA | upstream | 80260 | 33057960 ~ 33058362 (-) | False | LOC117597193 |
| TU88557 | lncRNA | upstream | 104839 | 33082539 ~ 33082974 (-) | False | LOC117597189 |
| TU88558 | lncRNA | upstream | 106698 | 33084398 ~ 33084836 (-) | True | G74731 |
| XM_034303863.1 | mRNA | downstream | 147218 | 32823558 ~ 32825567 (-) | True | LOC117597140 |
| XM_026935889.2 | mRNA | downstream | 1245233 | 31710064 ~ 31727552 (-) | True | nmnat2 |
| XM_034303857.1 | mRNA | downstream | 1428151 | 31538539 ~ 31544634 (-) | True | LOC113540064 |
| XM_026936953.2 | mRNA | downstream | 1439527 | 31528370 ~ 31533258 (-) | True | psmb5 |
| XM_034304039.1 | mRNA | downstream | 1503144 | 31379473 ~ 31469641 (-) | False | LOC113540461 |
| XM_026912180.2 | mRNA | upstream | 153387 | 33131087 ~ 33135775 (-) | False | c4h14orf119 |
| XM_026912181.2 | mRNA | upstream | 153387 | 33131087 ~ 33135467 (-) | False | c4h14orf119 |
| XM_026912179.2 | mRNA | upstream | 153387 | 33131087 ~ 33134319 (-) | True | c4h14orf119 |
| XM_026912175.2 | mRNA | upstream | 188242 | 33165942 ~ 33168027 (-) | False | cbln12 |
| XM_026912176.2 | mRNA | upstream | 188242 | 33165942 ~ 33168020 (-) | True | cbln12 |
| LOC117597177 | other | downstream | 1272 | 32971004 ~ 32971513 (-) | True | LOC117597177 |
| LOC117597170 | other | downstream | 22291 | 32949834 ~ 32950494 (-) | True | LOC117597170 |
| TU88533 | other | downstream | 25985 | 32946181 ~ 32946800 (-) | False | LOC117597171 |
| TU88528 | other | downstream | 104319 | 32865946 ~ 32868466 (-) | False | G74703 |
| TU88527 | other | downstream | 106324 | 32865946 ~ 32866461 (-) | True | G74703 |
| LOC117597142 | other | upstream | 18656 | 32996356 ~ 32996892 (-) | True | LOC117597142 |
| LOC117597007 | other | upstream | 55318 | 33033018 ~ 33033661 (-) | True | LOC117597007 |
| TU88550 | other | upstream | 57203 | 33034903 ~ 33042101 (-) | True | LOC117597009 |
| LOC117597009 | other | upstream | 57204 | 33034904 ~ 33035413 (-) | False | LOC117597009 |
| LOC117597008 | other | upstream | 59361 | 33037061 ~ 33037706 (-) | True | LOC117597008 |
