Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404071.2 |
| length | 179 |
| RNA type | ncRNA |
| GC content | 0.46 |
| exon number | 1 |
| gene id | LOC113540697 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 29524509 ~ 29524687 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU86901 | lncRNA | downstream | 204175 | 29273589 ~ 29320334 (-) | True | G73327 |
| TU86893 | lncRNA | downstream | 306351 | 29216270 ~ 29218158 (-) | True | G73319 |
| TU86892 | lncRNA | downstream | 309458 | 29213553 ~ 29215051 (-) | True | G73318 |
| TU86820 | lncRNA | downstream | 335169 | 29188158 ~ 29189340 (-) | True | G73249 |
| TU87006 | lncRNA | upstream | 15408 | 29540095 ~ 29540356 (-) | True | G73423 |
| TU87022 | lncRNA | upstream | 82914 | 29607601 ~ 29607805 (-) | True | G73439 |
| TU87036 | lncRNA | upstream | 146500 | 29671187 ~ 29674270 (-) | True | G73452 |
| TU87041 | lncRNA | upstream | 186399 | 29711086 ~ 29712194 (-) | True | G73457 |
| TU87042 | lncRNA | upstream | 188206 | 29712893 ~ 29713446 (-) | True | G73458 |
| XM_034303512.1 | mRNA | downstream | 58489 | 29461041 ~ 29466020 (-) | True | kcnmb2 |
| XM_026937229.2 | mRNA | downstream | 59711 | 29461041 ~ 29464798 (-) | False | kcnmb2 |
| XM_034303513.1 | mRNA | downstream | 59798 | 29461041 ~ 29464711 (-) | False | kcnmb2 |
| XM_026937224.2 | mRNA | downstream | 71716 | 29442115 ~ 29452793 (-) | True | mfsd8l2 |
| XM_034303445.1 | mRNA | downstream | 152983 | 29359500 ~ 29371526 (-) | True | pcolce2a |
| XM_026937263.2 | mRNA | upstream | 39534 | 29564221 ~ 29575414 (-) | True | LOC113540665 |
| XM_026937014.2 | mRNA | upstream | 52011 | 29576698 ~ 29592827 (-) | True | ripk2 |
| XM_026935978.2 | mRNA | upstream | 105283 | 29629970 ~ 29666855 (-) | False | LOC113539879 |
| XM_034303335.1 | mRNA | upstream | 105283 | 29629970 ~ 29666855 (-) | True | LOC113539879 |
| XM_026936973.2 | mRNA | upstream | 156557 | 29681244 ~ 29692555 (-) | True | si:ch211-13f8.2 |
| XR_003404072.2 | other | downstream | 597 | 29523723 ~ 29523912 (-) | True | LOC113540698 |
| XR_003404076.1 | other | downstream | 1043 | 29523394 ~ 29523466 (-) | True | LOC113540702 |
| TU86878 | other | downstream | 372128 | 29148638 ~ 29152381 (-) | False | usp33 |
| XR_004577982.1 | other | downstream | 639544 | 28873580 ~ 28884965 (-) | False | LOC117597037 |
| XR_004577983.1 | other | downstream | 639544 | 28882327 ~ 28884965 (-) | False | LOC117597037 |
| XR_003404077.1 | other | upstream | 302 | 29524989 ~ 29525061 (-) | True | LOC113540703 |
| XR_003404065.2 | other | upstream | 39915 | 29564602 ~ 29575727 (-) | False | LOC113540665 |
| XR_003403975.2 | other | upstream | 199901 | 29724588 ~ 29730857 (-) | True | zgc:110366 |
| TU87233 | other | upstream | 494819 | 30019506 ~ 30022525 (-) | True | G73619 |
| TU87613 | other | upstream | 1216982 | 30741669 ~ 30743826 (-) | False | LOC113540055 |
