Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404075.1 |
| length | 142 |
| RNA type | ncRNA |
| GC content | 0.55 |
| exon number | 1 |
| gene id | LOC113540701 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 17915630 ~ 17915771 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU78678 | lncRNA | downstream | 50747 | 17864010 ~ 17864883 (-) | True | G66355 |
| TU78672 | lncRNA | downstream | 103104 | 17799122 ~ 17812526 (-) | True | G66349 |
| TU78673 | lncRNA | downstream | 106616 | 17801666 ~ 17809014 (-) | True | G66350 |
| TU78620 | lncRNA | downstream | 214376 | 17696777 ~ 17701254 (-) | True | G66318 |
| TU78613 | lncRNA | downstream | 228532 | 17686886 ~ 17687098 (-) | True | G66311 |
| TU78732 | lncRNA | upstream | 99373 | 18015144 ~ 18020809 (-) | True | G66387 |
| TU79023 | lncRNA | upstream | 470790 | 18386561 ~ 18386990 (-) | True | G66651 |
| XR_003403990.2 | lncRNA | upstream | 583580 | 18499351 ~ 18514718 (-) | True | LOC113539972 |
| XR_003403989.2 | lncRNA | upstream | 585760 | 18501531 ~ 18514718 (-) | False | LOC113539972 |
| TU79437 | lncRNA | upstream | 1031547 | 18947318 ~ 18947539 (-) | True | G67016 |
| XM_026937073.2 | mRNA | downstream | 7740 | 17905533 ~ 17907890 (-) | True | sox19b |
| XM_026936072.2 | mRNA | downstream | 32270 | 17880515 ~ 17883360 (-) | True | mblac1 |
| XM_034303566.1 | mRNA | downstream | 35246 | 17875167 ~ 17880384 (-) | False | LOC113539930 |
| XM_026936061.2 | mRNA | downstream | 35246 | 17875167 ~ 17880384 (-) | True | LOC113539930 |
| XM_026936071.2 | mRNA | downstream | 44716 | 17868627 ~ 17870914 (-) | True | her8a |
| XM_026935839.2 | mRNA | upstream | 3475 | 17919246 ~ 17928221 (-) | True | senp3b |
| XM_026936446.2 | mRNA | upstream | 35245 | 17951016 ~ 17960932 (-) | True | LOC113540164 |
| XM_026936448.2 | mRNA | upstream | 53424 | 17969195 ~ 17972819 (-) | True | LOC113540166 |
| XM_026936447.2 | mRNA | upstream | 66248 | 17982019 ~ 17989755 (-) | True | phf23b |
| XM_026936726.2 | mRNA | upstream | 112906 | 18028677 ~ 18040250 (-) | True | slc1a1 |
| TU78662 | other | downstream | 85504 | 17792226 ~ 17830126 (-) | False | map11 |
| trnas-uga | other | downstream | 144399 | 17771150 ~ 17771231 (-) | True | trnas-uga |
| TU78578 | other | downstream | 280762 | 17594449 ~ 17634868 (-) | True | G66281 |
| TU78241 | other | downstream | 471456 | 17439493 ~ 17444174 (-) | False | rnaseka |
| TU78232 | other | downstream | 513166 | 17400594 ~ 17402464 (-) | True | G66053 |
| XR_003404117.1 | other | upstream | 1101052 | 19016823 ~ 19016953 (-) | True | LOC113540749 |
| XR_003404118.1 | other | upstream | 1101499 | 19017270 ~ 19017400 (-) | True | LOC113540750 |
| XR_004578062.1 | other | upstream | 1137936 | 19053707 ~ 19155217 (-) | False | LOC113540242 |
| XR_003404109.2 | other | upstream | 1306968 | 19222739 ~ 19222843 (-) | True | LOC113540739 |
| TU80099 | other | upstream | 1972408 | 19888179 ~ 19888726 (-) | True | G67587 |
