Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404117.1 |
| length | 131 |
| RNA type | ncRNA |
| GC content | 0.47 |
| exon number | 1 |
| gene id | LOC113540749 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 19016823 ~ 19016953 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU79437 | lncRNA | downstream | 69284 | 18947318 ~ 18947539 (-) | True | G67016 |
| XR_003403990.2 | lncRNA | downstream | 502105 | 18499351 ~ 18514718 (-) | True | LOC113539972 |
| XR_003403989.2 | lncRNA | downstream | 502105 | 18501531 ~ 18514718 (-) | False | LOC113539972 |
| TU79023 | lncRNA | downstream | 629833 | 18386561 ~ 18386990 (-) | True | G66651 |
| TU78732 | lncRNA | downstream | 996014 | 18015144 ~ 18020809 (-) | True | G66387 |
| TU79924 | lncRNA | upstream | 311395 | 19328348 ~ 19340529 (-) | True | G67454 |
| TU79923 | lncRNA | upstream | 316121 | 19333074 ~ 19339158 (-) | True | G67453 |
| TU80028 | lncRNA | upstream | 588539 | 19605492 ~ 19656442 (-) | True | G67527 |
| TU80030 | lncRNA | upstream | 599495 | 19616448 ~ 19629949 (-) | True | G67528 |
| TU80038 | lncRNA | upstream | 752404 | 19769357 ~ 19824919 (-) | True | G67535 |
| XM_034303423.1 | mRNA | downstream | 2518 | 18964454 ~ 19014305 (-) | False | dennd4c |
| XM_034303421.1 | mRNA | downstream | 2518 | 18964454 ~ 19014305 (-) | False | dennd4c |
| XM_034303422.1 | mRNA | downstream | 2518 | 18964454 ~ 19014305 (-) | True | dennd4c |
| XM_034303420.1 | mRNA | downstream | 2519 | 18964454 ~ 19014304 (-) | False | dennd4c |
| XM_034303647.1 | mRNA | downstream | 53074 | 18954712 ~ 18963749 (-) | False | acer2 |
| XM_026935905.2 | mRNA | upstream | 8180 | 19025133 ~ 19028898 (-) | True | plin2 |
| XM_026935902.2 | mRNA | upstream | 17539 | 19034492 ~ 19042269 (-) | True | larp7 |
| XM_026937056.2 | mRNA | upstream | 27869 | 19044822 ~ 19049448 (-) | True | LOC113540506 |
| XM_034303508.1 | mRNA | upstream | 29006 | 19045959 ~ 19049448 (-) | False | LOC113540506 |
| XM_026936589.2 | mRNA | upstream | 33197 | 19050150 ~ 19155215 (-) | True | LOC113540242 |
| XR_003404075.1 | other | downstream | 1101052 | 17915630 ~ 17915771 (-) | True | LOC113540701 |
| TU78662 | other | downstream | 1186697 | 17792226 ~ 17830126 (-) | False | map11 |
| trnas-uga | other | downstream | 1245592 | 17771150 ~ 17771231 (-) | True | trnas-uga |
| TU78578 | other | downstream | 1381955 | 17594449 ~ 17634868 (-) | True | G66281 |
| TU78241 | other | downstream | 1572649 | 17439493 ~ 17444174 (-) | False | rnaseka |
| XR_003404118.1 | other | upstream | 317 | 19017270 ~ 19017400 (-) | True | LOC113540750 |
| XR_004578062.1 | other | upstream | 36754 | 19053707 ~ 19155217 (-) | False | LOC113540242 |
| XR_003404109.2 | other | upstream | 205786 | 19222739 ~ 19222843 (-) | True | LOC113540739 |
| TU80099 | other | upstream | 871226 | 19888179 ~ 19888726 (-) | True | G67587 |
| XR_004578055.1 | other | upstream | 914637 | 19931590 ~ 19943834 (-) | True | LOC113539792 |
