Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404806.2 |
| length | 408 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 5 |
| gene id | LOC113547270 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 5264016 ~ 5266014 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70430 | lncRNA | upstream | 246214 | 5011920 ~ 5017802 (+) | True | G59521 |
| TU70431 | lncRNA | upstream | 246214 | 5011920 ~ 5017802 (+) | False | G59521 |
| TU70396 | lncRNA | upstream | 249203 | 4993489 ~ 5014813 (+) | False | G59492 |
| TU70379 | lncRNA | upstream | 305702 | 4958062 ~ 4958314 (+) | True | G59483 |
| TU70375 | lncRNA | upstream | 311418 | 4952371 ~ 4952598 (+) | True | G59479 |
| TU70597 | lncRNA | downstream | 35868 | 5301882 ~ 5363888 (+) | True | G59663 |
| TU70598 | lncRNA | downstream | 35868 | 5301882 ~ 5369456 (+) | False | G59663 |
| TU70634 | lncRNA | downstream | 124897 | 5390911 ~ 5391425 (+) | False | LOC113547289 |
| TU70665 | lncRNA | downstream | 163267 | 5429281 ~ 5429622 (+) | True | G59725 |
| TU70652 | lncRNA | downstream | 171830 | 5437844 ~ 5438721 (+) | True | G59712 |
| XM_034304016.1 | mRNA | upstream | 11167 | 5240683 ~ 5252849 (+) | True | LOC113547265 |
| XM_034304017.1 | mRNA | upstream | 11167 | 5240683 ~ 5252849 (+) | False | LOC113547265 |
| XM_034304018.1 | mRNA | upstream | 54255 | 5195675 ~ 5209761 (+) | True | LOC113547266 |
| XM_034303598.1 | mRNA | upstream | 72271 | 5191076 ~ 5191745 (+) | True | LOC113547246 |
| XM_026947515.2 | mRNA | upstream | 74303 | 5179554 ~ 5189713 (+) | True | LOC113547261 |
| XM_034303601.1 | mRNA | downstream | 20343 | 5286357 ~ 5306541 (+) | True | LOC113547263 |
| XM_026947553.2 | mRNA | downstream | 122354 | 5388368 ~ 5391829 (+) | True | LOC113547289 |
| XM_026947549.2 | mRNA | downstream | 136270 | 5402284 ~ 5410215 (+) | True | LOC113547286 |
| XM_026947542.2 | mRNA | downstream | 165222 | 5431236 ~ 5433720 (+) | True | LOC113547281 |
| XM_026947568.2 | mRNA | downstream | 183468 | 5449482 ~ 5466119 (+) | True | angptl1b |
| XR_004578077.1 | other | upstream | 75970 | 5179562 ~ 5188046 (+) | False | LOC113547261 |
| TU70397 | other | upstream | 255883 | 4974195 ~ 5008133 (+) | True | G59492 |
| TU70376 | other | upstream | 308554 | 4955135 ~ 4955462 (+) | False | LOC113547245 |
| TU70239 | other | upstream | 555618 | 4707442 ~ 4708398 (+) | True | G59366 |
| XR_004578071.1 | other | upstream | 610895 | 4650477 ~ 4653121 (+) | True | LOC117597167 |
| TU70896 | other | downstream | 314130 | 5580144 ~ 5596126 (+) | False | LOC113547291 |
| trnat-ugu_1 | other | downstream | 873286 | 6139300 ~ 6139372 (+) | True | trnat-ugu_1 |
| trnat-ugu_2 | other | downstream | 877551 | 6143565 ~ 6143637 (+) | False | trnat-ugu_2 |
| trnar-ucu_1 | other | downstream | 1164472 | 6430486 ~ 6430577 (+) | True | trnar-ucu_1 |
| XR_004578001.1 | other | downstream | 1329112 | 6595126 ~ 6596561 (+) | False | LOC117597080 |
