Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577966.1 |
| length | 289 |
| lncRNA type | intronic |
| GC content | 0.48 |
| exon number | 2 |
| gene id | LOC117597021 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 481275 ~ 482075 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68325 | lncRNA | downstream | 1991 | 440278 ~ 479284 (-) | True | G57800 |
| TU68316 | lncRNA | downstream | 7017 | 389331 ~ 474258 (-) | False | G57794 |
| TU68336 | lncRNA | downstream | 9651 | 470849 ~ 471624 (-) | True | G57808 |
| TU68310 | lncRNA | downstream | 23297 | 381065 ~ 457978 (-) | True | G57792 |
| TU68306 | lncRNA | downstream | 29610 | 375243 ~ 451665 (-) | False | LOC117597013 |
| TU68338 | lncRNA | upstream | 10577 | 492652 ~ 518985 (-) | True | G57810 |
| XR_004577979.1 | lncRNA | upstream | 16134 | 498209 ~ 510003 (-) | True | LOC117597030 |
| TU68340 | lncRNA | upstream | 19470 | 501545 ~ 708236 (-) | False | G57811 |
| TU68259 | lncRNA | upstream | 25019 | 507094 ~ 846016 (-) | True | G57745 |
| TU68217 | lncRNA | upstream | 39911 | 521986 ~ 699337 (-) | False | G57733 |
| XM_034303497.1 | mRNA | downstream | 29582 | 387311 ~ 451693 (-) | False | LOC117597013 |
| XM_034303491.1 | mRNA | downstream | 29584 | 395440 ~ 451691 (-) | False | LOC117597013 |
| XM_034303496.1 | mRNA | downstream | 32704 | 395440 ~ 448571 (-) | False | LOC117597013 |
| XM_034303494.1 | mRNA | downstream | 32724 | 395440 ~ 448551 (-) | False | LOC117597013 |
| XM_034303493.1 | mRNA | downstream | 69066 | 395440 ~ 412209 (-) | True | LOC117597013 |
| XM_034303503.1 | mRNA | upstream | 217974 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303500.1 | mRNA | upstream | 228284 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | upstream | 228290 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303498.1 | mRNA | upstream | 365998 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 381303 | 863378 ~ 886395 (-) | False | dis3l2 |
| TU68285 | other | downstream | 182819 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 383158 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68368 | other | upstream | 130168 | 612243 ~ 614243 (-) | True | G57830 |
| TU68378 | other | upstream | 201413 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | upstream | 251480 | 733555 ~ 734771 (-) | True | G57740 |
| TU68216 | other | upstream | 357357 | 839432 ~ 856952 (-) | False | G57733 |
| TU68413 | other | upstream | 559702 | 1041777 ~ 1048841 (-) | False | G57868 |
