Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004577977.1 |
| length | 948 |
| lncRNA type | read_through |
| GC content | 0.38 |
| exon number | 2 |
| gene id | LOC117597028 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 441942 ~ 443429 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU68324 | lncRNA | downstream | 6269 | 429960 ~ 435673 (-) | True | G57799 |
| TU68314 | lncRNA | downstream | 12406 | 427215 ~ 429536 (-) | True | G57793 |
| XR_004577972.1 | lncRNA | downstream | 15857 | 421730 ~ 426085 (-) | True | LOC117597025 |
| TU68274 | lncRNA | downstream | 20633 | 336270 ~ 421309 (-) | True | G57760 |
| TU68215 | lncRNA | downstream | 22074 | 300980 ~ 419868 (-) | False | G57733 |
| TU68261 | lncRNA | upstream | 9204 | 452633 ~ 698272 (-) | True | G57747 |
| TU68333 | lncRNA | upstream | 11413 | 454842 ~ 501206 (-) | True | G57805 |
| TU68311 | lncRNA | upstream | 14060 | 457489 ~ 503881 (-) | False | G57792 |
| TU68336 | lncRNA | upstream | 27420 | 470849 ~ 471624 (-) | True | G57808 |
| TU68239 | lncRNA | upstream | 37491 | 480920 ~ 514265 (-) | False | G57733 |
| XM_034303493.1 | mRNA | downstream | 29733 | 395440 ~ 412209 (-) | True | LOC117597013 |
| XM_034303492.1 | mRNA | downstream | 36178 | 395440 ~ 405764 (-) | False | LOC117597013 |
| XM_034303495.1 | mRNA | downstream | 36189 | 395440 ~ 405753 (-) | False | LOC117597013 |
| XM_034303487.1 | mRNA | downstream | 56099 | 347059 ~ 385843 (-) | False | LOC117597012 |
| XM_034303485.1 | mRNA | downstream | 58856 | 347059 ~ 383086 (-) | False | LOC117597012 |
| XM_034303503.1 | mRNA | upstream | 256620 | 700049 ~ 704378 (-) | True | LOC117597018 |
| XM_034303500.1 | mRNA | upstream | 266930 | 710359 ~ 719607 (-) | True | LOC117597015 |
| XM_034303499.1 | mRNA | upstream | 266936 | 710365 ~ 719607 (-) | False | LOC117597015 |
| XM_034303498.1 | mRNA | upstream | 404644 | 848073 ~ 857200 (-) | True | LOC117597014 |
| XM_034303472.1 | mRNA | upstream | 419949 | 863378 ~ 886395 (-) | False | dis3l2 |
| TU68285 | other | downstream | 143486 | 290510 ~ 298456 (-) | False | eif2b5 |
| TU67777 | other | downstream | 343825 | 95428 ~ 98117 (-) | False | LOC117596995 |
| TU68328 | other | upstream | 5296 | 448725 ~ 496852 (-) | False | LOC117597012 |
| TU68368 | other | upstream | 168814 | 612243 ~ 614243 (-) | True | G57830 |
| TU68378 | other | upstream | 240059 | 683488 ~ 746031 (-) | True | G57838 |
| TU68254 | other | upstream | 290126 | 733555 ~ 734771 (-) | True | G57740 |
| TU68216 | other | upstream | 396003 | 839432 ~ 856952 (-) | False | G57733 |
