Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578003.1 |
| length | 821 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 7 |
| gene id | LOC113547257 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 6587543 ~ 6602226 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71370 | lncRNA | downstream | 192472 | 6394865 ~ 6395071 (-) | True | G60333 |
| TU71365 | lncRNA | downstream | 197466 | 6389703 ~ 6390077 (-) | True | G60328 |
| TU71348 | lncRNA | downstream | 207646 | 6379698 ~ 6379897 (-) | True | G60311 |
| TU71204 | lncRNA | downstream | 614930 | 5969895 ~ 5972613 (-) | True | G60181 |
| TU71206 | lncRNA | downstream | 614930 | 5969895 ~ 5972613 (-) | False | G60181 |
| TU71581 | lncRNA | upstream | 39745 | 6641971 ~ 6642185 (-) | True | G60503 |
| TU71799 | lncRNA | upstream | 183101 | 6785327 ~ 6792952 (-) | True | G60672 |
| TU71790 | lncRNA | upstream | 276418 | 6878644 ~ 6881335 (-) | True | G60669 |
| TU71867 | lncRNA | upstream | 628428 | 7230654 ~ 7230904 (-) | True | G60727 |
| TU71866 | lncRNA | upstream | 639899 | 7242125 ~ 7246436 (-) | True | G60726 |
| XM_034303940.1 | mRNA | downstream | 27217 | 6518463 ~ 6560326 (-) | False | mylk4a |
| XM_034303939.1 | mRNA | downstream | 27217 | 6518463 ~ 6560326 (-) | False | mylk4a |
| XM_034303938.1 | mRNA | downstream | 56323 | 6518463 ~ 6531220 (-) | False | mylk4a |
| XM_026947558.2 | mRNA | downstream | 56323 | 6518463 ~ 6531220 (-) | False | mylk4a |
| XM_026947560.2 | mRNA | downstream | 56323 | 6518463 ~ 6531220 (-) | False | mylk4a |
| XM_026947504.2 | mRNA | upstream | 574 | 6602800 ~ 6612842 (-) | True | LOC113547256 |
| XM_034304050.1 | mRNA | upstream | 173753 | 6775979 ~ 6778040 (-) | True | LOC117597185 |
| XM_034303606.1 | mRNA | upstream | 176130 | 6778356 ~ 6779988 (-) | True | LOC117597065 |
| XM_034303607.1 | mRNA | upstream | 177769 | 6779995 ~ 6789815 (-) | True | LOC117597066 |
| XM_034303608.1 | mRNA | upstream | 192859 | 6795085 ~ 6798486 (-) | True | LOC117597067 |
| trnae-cuc_12 | other | downstream | 143728 | 6443744 ~ 6443815 (-) | True | trnae-cuc_12 |
| trnak-cuu_3 | other | downstream | 406584 | 6180887 ~ 6180959 (-) | True | trnak-cuu_3 |
| TU71184 | other | downstream | 627998 | 5900249 ~ 5959545 (-) | False | G60166 |
| TU71182 | other | downstream | 657344 | 5900249 ~ 5930199 (-) | True | G60166 |
| TU70820 | other | downstream | 1101746 | 5478542 ~ 5485797 (-) | False | cldn1 |
| TU71817 | other | upstream | 280243 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
| XR_004578041.1 | other | upstream | 1973280 | 8575506 ~ 8578850 (-) | False | LOC113526753 |
| TU72820 | other | upstream | 2381008 | 8983234 ~ 8984453 (-) | True | G61478 |
| XR_003403995.2 | other | upstream | 2712623 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| TU72884 | other | upstream | 2735600 | 9337826 ~ 9338745 (-) | True | G61537 |
