Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578034.1 |
| length | 163 |
| RNA type | ncRNA |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC117597100 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 3710571 ~ 3724565 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU69902 | lncRNA | downstream | 110370 | 3599986 ~ 3600201 (-) | True | G59075 |
| TU69791 | lncRNA | downstream | 429996 | 3248427 ~ 3280575 (-) | True | G58969 |
| TU69763 | lncRNA | downstream | 434500 | 3267913 ~ 3276071 (-) | False | ptprn2 |
| TU69787 | lncRNA | downstream | 480251 | 3229450 ~ 3230320 (-) | True | G58965 |
| TU69781 | lncRNA | downstream | 520444 | 3188324 ~ 3190127 (-) | True | G58960 |
| TU70067 | lncRNA | upstream | 170636 | 3895201 ~ 3897744 (-) | False | LOC117597092 |
| TU70073 | lncRNA | upstream | 178373 | 3902938 ~ 4281899 (-) | True | G59223 |
| XR_004578023.1 | lncRNA | upstream | 190018 | 3914583 ~ 3917647 (-) | True | LOC113547221 |
| TU70070 | lncRNA | upstream | 191638 | 3916203 ~ 3917699 (-) | False | LOC113547221 |
| TU70071 | lncRNA | upstream | 204482 | 3929047 ~ 3957093 (-) | False | LOC113547221 |
| XM_034303814.1 | mRNA | downstream | 24 | 3704774 ~ 3710547 (-) | True | LOC113525490 |
| XM_034303798.1 | mRNA | downstream | 71363 | 3632029 ~ 3639208 (-) | False | si:ch73-174h16.4 |
| XM_034303794.1 | mRNA | downstream | 127559 | 3538315 ~ 3583012 (-) | True | esyt2b |
| XM_034303572.1 | mRNA | downstream | 175752 | 3526493 ~ 3534819 (-) | True | LOC117597049 |
| XM_034303554.1 | mRNA | downstream | 224220 | 3460872 ~ 3486351 (-) | True | ncapg2 |
| XM_034303809.1 | mRNA | upstream | 170027 | 3894592 ~ 3908079 (-) | True | LOC117597092 |
| XM_034303797.1 | mRNA | upstream | 446634 | 4171199 ~ 4210106 (-) | True | LOC113547240 |
| XM_034303795.1 | mRNA | upstream | 505920 | 4230485 ~ 4256278 (-) | True | LOC113537670 |
| XM_034303587.1 | mRNA | upstream | 544603 | 4269168 ~ 4284392 (-) | True | LOC117597053 |
| XM_026947467.2 | mRNA | upstream | 790038 | 4514603 ~ 4527107 (-) | True | maf1b |
| XR_004578021.1 | other | downstream | 71363 | 3629988 ~ 3639208 (-) | True | si:ch73-174h16.4 |
| TU69907 | other | downstream | 77338 | 3630059 ~ 3633233 (-) | False | si:ch73-174h16.4 |
| TU69894 | other | downstream | 119834 | 3586783 ~ 3590737 (-) | True | G59069 |
| TU69489 | other | downstream | 893021 | 2814990 ~ 2817550 (-) | True | G58696 |
| trnag-ucc_14 | other | downstream | 908521 | 2801979 ~ 2802050 (-) | True | trnag-ucc_14 |
| TU70066 | other | upstream | 170636 | 3895201 ~ 3920131 (-) | False | LOC117597092 |
| TU70112 | other | upstream | 508085 | 4232650 ~ 4235239 (-) | False | LOC113537670 |
| TU70115 | other | upstream | 513832 | 4238397 ~ 4256284 (-) | False | LOC113537670 |
| TU70276 | other | upstream | 921891 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| trnar-ucg_1 | other | upstream | 1085227 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
