Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578132.1 |
| length | 208 |
| lncRNA type | read_through |
| GC content | 0.36 |
| exon number | 1 |
| gene id | LOC117597224 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 9507035 ~ 9507242 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578120.1 | lncRNA | downstream | 381 | 9506444 ~ 9506654 (-) | True | LOC117597212 |
| XR_004578141.1 | lncRNA | downstream | 3761 | 9503062 ~ 9503274 (-) | True | LOC117597233 |
| XR_004578142.1 | lncRNA | downstream | 7104 | 9499719 ~ 9499931 (-) | True | LOC117597234 |
| TU73311 | lncRNA | downstream | 52329 | 9448515 ~ 9454706 (-) | True | G61881 |
| TU73304 | lncRNA | downstream | 76203 | 9428794 ~ 9430832 (-) | True | G61876 |
| XR_004578122.1 | lncRNA | upstream | 836 | 9508078 ~ 9508282 (-) | True | LOC117597214 |
| XR_004578154.1 | lncRNA | upstream | 1464 | 9508706 ~ 9508916 (-) | True | LOC117597246 |
| XR_004578146.1 | lncRNA | upstream | 2510 | 9509752 ~ 9509963 (-) | True | LOC113540730 |
| XR_004578129.1 | lncRNA | upstream | 3159 | 9510401 ~ 9510607 (-) | False | LOC117597223 |
| TU73319 | lncRNA | upstream | 3329 | 9510571 ~ 9516883 (-) | True | LOC117597223 |
| XM_034303879.1 | mRNA | downstream | 22434 | 9474177 ~ 9484601 (-) | False | LOC113539885 |
| XM_026935986.2 | mRNA | downstream | 22434 | 9474178 ~ 9484601 (-) | True | LOC113539885 |
| XM_034303880.1 | mRNA | downstream | 22434 | 9474816 ~ 9484601 (-) | False | LOC113539885 |
| XM_034303878.1 | mRNA | downstream | 22434 | 9474862 ~ 9484601 (-) | False | LOC113539885 |
| XM_034303877.1 | mRNA | downstream | 22434 | 9475112 ~ 9484601 (-) | False | LOC113539885 |
| XM_034303884.1 | mRNA | upstream | 26755 | 9533997 ~ 9571464 (-) | False | capn1 |
| XM_026936422.2 | mRNA | upstream | 375469 | 9882711 ~ 9889757 (-) | True | zgc:101810 |
| XM_034303449.1 | mRNA | upstream | 385109 | 9892351 ~ 9896258 (-) | False | six7 |
| XM_026937032.2 | mRNA | upstream | 385109 | 9892351 ~ 9896256 (-) | True | six7 |
| XM_026935933.2 | mRNA | upstream | 400317 | 9907559 ~ 9911772 (-) | True | b4gat1 |
| TU72884 | other | downstream | 168290 | 9337826 ~ 9338745 (-) | True | G61537 |
| XR_003403995.2 | other | downstream | 179604 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
| TU72820 | other | downstream | 522582 | 8983234 ~ 8984453 (-) | True | G61478 |
| XR_004578041.1 | other | downstream | 928185 | 8575506 ~ 8578850 (-) | False | LOC113526753 |
| TU71817 | other | downstream | 2607808 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
| TU73323 | other | upstream | 19332 | 9526574 ~ 9528803 (-) | False | LOC113526752 |
| TU73432 | other | upstream | 269036 | 9776278 ~ 9805318 (-) | True | G61972 |
| TU73337 | other | upstream | 520745 | 10027987 ~ 10037575 (-) | False | G61900 |
| trnan-guu | other | upstream | 967154 | 10474396 ~ 10474470 (-) | True | trnan-guu |
| trnan-guu_1 | other | upstream | 968381 | 10475623 ~ 10475696 (-) | True | trnan-guu_1 |
