Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnag-ucc_11 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.56 |
| exon number | 1 |
| gene id | trnag-ucc_11 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 2751198 ~ 2751269 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU69453 | lncRNA | downstream | 24915 | 2680581 ~ 2726283 (-) | True | trnag-ucc_9 |
| TU69449 | lncRNA | downstream | 75169 | 2672771 ~ 2676029 (-) | True | trnag-ucc_4 |
| TU69432 | lncRNA | downstream | 132405 | 2607752 ~ 2618793 (-) | True | G58648 |
| TU69434 | lncRNA | downstream | 133769 | 2611416 ~ 2617429 (-) | True | G58650 |
| TU69428 | lncRNA | downstream | 140946 | 2604477 ~ 2610252 (-) | True | G58645 |
| TU69498 | lncRNA | upstream | 79903 | 2831172 ~ 2831373 (-) | True | G58703 |
| TU69499 | lncRNA | upstream | 81409 | 2832678 ~ 2834631 (-) | True | G58704 |
| XR_003402482.2 | lncRNA | upstream | 93311 | 2844580 ~ 2853974 (-) | True | LOC113524008 |
| TU69605 | lncRNA | upstream | 278434 | 3029703 ~ 3084722 (-) | False | G58809 |
| TU69634 | lncRNA | upstream | 321904 | 3073173 ~ 3073765 (-) | True | G58832 |
| XM_034303541.1 | mRNA | downstream | 18692 | 2730786 ~ 2732506 (-) | True | LOC117597042 |
| XM_026910111.2 | mRNA | downstream | 402854 | 2284687 ~ 2348344 (-) | False | greb1l |
| XM_026910112.2 | mRNA | downstream | 430129 | 2284687 ~ 2321069 (-) | False | greb1l |
| XM_026910110.2 | mRNA | downstream | 430129 | 2284687 ~ 2321069 (-) | True | greb1l |
| XM_026910091.2 | mRNA | downstream | 538597 | 2204789 ~ 2212601 (-) | True | LOC113523983 |
| XM_034303550.1 | mRNA | upstream | 14249 | 2765518 ~ 2767521 (-) | True | LOC117597045 |
| XM_026910119.2 | mRNA | upstream | 53226 | 2804495 ~ 2811641 (-) | False | ccdc96 |
| XM_034304004.1 | mRNA | upstream | 53226 | 2804495 ~ 2811402 (-) | True | ccdc96 |
| XM_026910120.2 | mRNA | upstream | 53226 | 2804495 ~ 2811275 (-) | False | ccdc96 |
| XM_034304125.1 | mRNA | upstream | 84008 | 2835277 ~ 2841271 (-) | True | LOC113524014 |
| trnag-ucc_10 | other | downstream | 9370 | 2741757 ~ 2741828 (-) | True | trnag-ucc_10 |
| trnag-ucc_9 | other | downstream | 24914 | 2726213 ~ 2726284 (-) | False | trnag-ucc_9 |
| trnag-ucc_8 | other | downstream | 35097 | 2716030 ~ 2716101 (-) | True | trnag-ucc_8 |
| trnag-ucc_7 | other | downstream | 41000 | 2710127 ~ 2710198 (-) | True | trnag-ucc_7 |
| trnag-ucc_6 | other | downstream | 45076 | 2706051 ~ 2706122 (-) | True | trnag-ucc_6 |
| trnag-ucc_12 | other | upstream | 31008 | 2782277 ~ 2782348 (-) | True | trnag-ucc_12 |
| trnar-ucu | other | upstream | 36433 | 2787702 ~ 2787773 (-) | True | trnar-ucu |
| trnag-ucc_13 | other | upstream | 40604 | 2791873 ~ 2791944 (-) | True | trnag-ucc_13 |
| trnag-ucc_14 | other | upstream | 50710 | 2801979 ~ 2802050 (-) | True | trnag-ucc_14 |
| TU69489 | other | upstream | 63721 | 2814990 ~ 2817550 (-) | True | G58696 |
