Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnak-cuu_3 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.60 |
| exon number | 1 |
| gene id | trnak-cuu_3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 6180887 ~ 6180959 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71204 | lncRNA | downstream | 208274 | 5969895 ~ 5972613 (-) | True | G60181 |
| TU71206 | lncRNA | downstream | 208274 | 5969895 ~ 5972613 (-) | False | G60181 |
| TU71195 | lncRNA | downstream | 242755 | 5914343 ~ 5938132 (-) | True | G60173 |
| TU71164 | lncRNA | downstream | 281872 | 5897379 ~ 5899015 (-) | True | G60151 |
| TU71166 | lncRNA | downstream | 281872 | 5898093 ~ 5899015 (-) | False | G60151 |
| TU71348 | lncRNA | upstream | 198739 | 6379698 ~ 6379897 (-) | True | G60311 |
| TU71365 | lncRNA | upstream | 208744 | 6389703 ~ 6390077 (-) | True | G60328 |
| TU71370 | lncRNA | upstream | 213906 | 6394865 ~ 6395071 (-) | True | G60333 |
| XR_004578003.1 | lncRNA | upstream | 406584 | 6587543 ~ 6602226 (-) | False | LOC113547257 |
| XR_004578002.1 | lncRNA | upstream | 407052 | 6588011 ~ 6602226 (-) | True | LOC113547257 |
| XM_026947470.2 | mRNA | downstream | 194672 | 5972624 ~ 5986215 (-) | True | ripk1l |
| XM_026947543.2 | mRNA | downstream | 213583 | 5956127 ~ 5967304 (-) | True | LOC113547282 |
| XM_034303996.1 | mRNA | downstream | 231207 | 5931330 ~ 5949680 (-) | True | LOC113547251 |
| XM_034304148.1 | mRNA | downstream | 262927 | 5904196 ~ 5917960 (-) | True | LOC113547287 |
| XM_034304149.1 | mRNA | downstream | 262927 | 5904333 ~ 5917960 (-) | False | LOC113547287 |
| XM_034303940.1 | mRNA | upstream | 337504 | 6518463 ~ 6560326 (-) | False | mylk4a |
| XM_034303939.1 | mRNA | upstream | 337504 | 6518463 ~ 6560326 (-) | False | mylk4a |
| XM_034303938.1 | mRNA | upstream | 337504 | 6518463 ~ 6531220 (-) | False | mylk4a |
| XM_026947558.2 | mRNA | upstream | 337504 | 6518463 ~ 6531220 (-) | False | mylk4a |
| XM_026947560.2 | mRNA | upstream | 337504 | 6518463 ~ 6531220 (-) | False | mylk4a |
| TU71184 | other | downstream | 221342 | 5900249 ~ 5959545 (-) | False | G60166 |
| TU71182 | other | downstream | 250688 | 5900249 ~ 5930199 (-) | True | G60166 |
| TU70820 | other | downstream | 695090 | 5478542 ~ 5485797 (-) | False | cldn1 |
| trnar-ucg_1 | other | downstream | 1371023 | 4809792 ~ 4809864 (-) | True | trnar-ucg_1 |
| TU70276 | other | downstream | 1533007 | 4646456 ~ 4647880 (-) | False | LOC113547272 |
| trnae-cuc_12 | other | upstream | 262785 | 6443744 ~ 6443815 (-) | True | trnae-cuc_12 |
| TU71817 | other | upstream | 701510 | 6882469 ~ 6899227 (-) | False | LOC117597002 |
| XR_004578041.1 | other | upstream | 2394547 | 8575506 ~ 8578850 (-) | False | LOC113526753 |
| TU72820 | other | upstream | 2802275 | 8983234 ~ 8984453 (-) | True | G61478 |
| XR_003403995.2 | other | upstream | 3133890 | 9314849 ~ 9327431 (-) | False | LOC113540087 |
