Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnas-uga |
| length | 82 |
| RNA type | tRNA |
| GC content | 0.62 |
| exon number | 1 |
| gene id | trnas-uga |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 17771150 ~ 17771231 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU78620 | lncRNA | downstream | 69896 | 17696777 ~ 17701254 (-) | True | G66318 |
| TU78613 | lncRNA | downstream | 84052 | 17686886 ~ 17687098 (-) | True | G66311 |
| TU78612 | lncRNA | downstream | 84916 | 17686021 ~ 17686234 (-) | True | G66310 |
| TU78544 | lncRNA | downstream | 133164 | 17571331 ~ 17637986 (-) | True | G66274 |
| TU78558 | lncRNA | downstream | 133164 | 17574943 ~ 17637986 (-) | False | G66274 |
| TU78672 | lncRNA | upstream | 27891 | 17799122 ~ 17812526 (-) | True | G66349 |
| TU78673 | lncRNA | upstream | 30435 | 17801666 ~ 17809014 (-) | True | G66350 |
| TU78678 | lncRNA | upstream | 92779 | 17864010 ~ 17864883 (-) | True | G66355 |
| TU78732 | lncRNA | upstream | 243913 | 18015144 ~ 18020809 (-) | True | G66387 |
| TU79023 | lncRNA | upstream | 615330 | 18386561 ~ 18386990 (-) | True | G66651 |
| XM_026936046.2 | mRNA | downstream | 1264 | 17765148 ~ 17769886 (-) | True | zgc:77439 |
| XM_026936047.2 | mRNA | downstream | 1924 | 17765148 ~ 17769226 (-) | False | zgc:77439 |
| XM_026936055.2 | mRNA | downstream | 19511 | 17747955 ~ 17751639 (-) | True | serpine1 |
| XM_026936054.2 | mRNA | downstream | 19531 | 17747955 ~ 17751619 (-) | False | serpine1 |
| XM_026936078.2 | mRNA | downstream | 24015 | 17737776 ~ 17747135 (-) | True | ap1s1 |
| XM_026936039.2 | mRNA | upstream | 55409 | 17826640 ~ 17839915 (-) | True | map11 |
| XM_026936040.2 | mRNA | upstream | 71923 | 17843154 ~ 17853369 (-) | True | gal3st4 |
| XM_026936071.2 | mRNA | upstream | 97396 | 17868627 ~ 17870914 (-) | True | her8a |
| XM_034303566.1 | mRNA | upstream | 103936 | 17875167 ~ 17880384 (-) | False | LOC113539930 |
| XM_026936061.2 | mRNA | upstream | 103936 | 17875167 ~ 17880384 (-) | True | LOC113539930 |
| TU78578 | other | downstream | 136282 | 17594449 ~ 17634868 (-) | True | G66281 |
| TU78241 | other | downstream | 326976 | 17439493 ~ 17444174 (-) | False | rnaseka |
| TU78232 | other | downstream | 368686 | 17400594 ~ 17402464 (-) | True | G66053 |
| TU77801 | other | downstream | 1165433 | 16604108 ~ 16605717 (-) | False | bmp15 |
| TU77497 | other | downstream | 1347986 | 16419310 ~ 16423164 (-) | True | tnfsf12 |
| TU78662 | other | upstream | 20995 | 17792226 ~ 17830126 (-) | False | map11 |
| XR_003404075.1 | other | upstream | 144399 | 17915630 ~ 17915771 (-) | True | LOC113540701 |
| XR_003404117.1 | other | upstream | 1245592 | 19016823 ~ 19016953 (-) | True | LOC113540749 |
| XR_003404118.1 | other | upstream | 1246039 | 19017270 ~ 19017400 (-) | True | LOC113540750 |
| XR_004578062.1 | other | upstream | 1282476 | 19053707 ~ 19155217 (-) | False | LOC113540242 |
