Item | Value |
---|---|
RNA id | trnat-ugu_8 |
length | 73 |
RNA type | tRNA |
GC content | 0.58 |
exon number | 1 |
gene id | trnat-ugu_8 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 27621311 ~ 27621383 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU85492 | lncRNA | upstream | 61884 | 27556204 ~ 27559427 (+) | True | LOC113540592 |
XR_003404048.2 | lncRNA | upstream | 62201 | 27556085 ~ 27559110 (+) | False | LOC113540592 |
TU85491 | lncRNA | upstream | 62209 | 27556204 ~ 27559102 (+) | False | LOC113540592 |
TU85493 | lncRNA | upstream | 62298 | 27556204 ~ 27559013 (+) | False | LOC113540592 |
TU85494 | lncRNA | upstream | 65605 | 27553127 ~ 27555706 (+) | True | G72118 |
TU85626 | lncRNA | downstream | 390361 | 28011744 ~ 28012459 (+) | True | G72236 |
TU85674 | lncRNA | downstream | 493068 | 28114451 ~ 28122142 (+) | True | G72276 |
TU85711 | lncRNA | downstream | 681468 | 28302851 ~ 28383408 (+) | False | insig1 |
TU85733 | lncRNA | downstream | 695021 | 28316404 ~ 28328181 (+) | False | htr5ab |
TU85742 | lncRNA | downstream | 847565 | 28468948 ~ 28471765 (+) | True | G72336 |
XM_034304070.1 | mRNA | upstream | 39289 | 27562149 ~ 27582022 (+) | True | dvl3a |
XM_034303993.1 | mRNA | upstream | 75182 | 27534676 ~ 27546129 (+) | True | ap2m1a |
XM_026936183.2 | mRNA | upstream | 104107 | 27509850 ~ 27517204 (+) | True | si:ch211-252f13.5 |
XM_026935807.2 | mRNA | upstream | 113112 | 27495848 ~ 27508199 (+) | True | abi1b |
XM_026936880.2 | mRNA | downstream | 7065 | 27628448 ~ 27639961 (+) | True | prtfdc1b |
XM_034303530.1 | mRNA | downstream | 27431 | 27648814 ~ 27698656 (+) | True | arhgap21b |
XM_034303531.1 | mRNA | downstream | 27431 | 27648814 ~ 27698656 (+) | False | arhgap21b |
XM_034303532.1 | mRNA | downstream | 27431 | 27648814 ~ 27698656 (+) | False | arhgap21b |
XM_034303535.1 | mRNA | downstream | 27431 | 27648814 ~ 27698656 (+) | False | arhgap21b |
trnat-ugu_6 | other | upstream | 634 | 27620605 ~ 27620677 (+) | True | trnat-ugu_6 |
XR_003404070.2 | other | upstream | 63409 | 27557765 ~ 27557902 (+) | True | LOC113540696 |
XR_003404069.1 | other | upstream | 64663 | 27556517 ~ 27556648 (+) | True | LOC113540695 |
trnat-ugu_5 | other | upstream | 131986 | 27489253 ~ 27489325 (+) | True | trnat-ugu_5 |
XR_003404108.2 | other | upstream | 508057 | 27113148 ~ 27113254 (+) | True | LOC113540738 |
TU86406 | other | downstream | 1252973 | 28874356 ~ 28912104 (+) | True | G72873 |
TU86682 | other | downstream | 1998610 | 29619993 ~ 29623037 (+) | False | asip2b |
TU87615 | other | downstream | 3124748 | 30746131 ~ 30767132 (+) | True | G73944 |
TU87616 | other | downstream | 3124748 | 30746131 ~ 30767132 (+) | False | G73944 |
TU87706 | other | downstream | 3440347 | 31061730 ~ 31097888 (+) | False | spsb4a |