Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU45903 |
| length | 1076 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G38721 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 1806634 ~ 1814009 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45767 | lncRNA | upstream | 33857 | 1287572 ~ 1772777 (+) | False | G38608 |
| TU45890 | lncRNA | upstream | 42281 | 1763871 ~ 1764353 (+) | True | G38709 |
| TU45772 | lncRNA | upstream | 171667 | 1272968 ~ 1634967 (+) | False | G38608 |
| TU45865 | lncRNA | upstream | 285380 | 1498168 ~ 1521254 (+) | True | G38687 |
| TU45857 | lncRNA | upstream | 327495 | 1478557 ~ 1479139 (+) | True | G38681 |
| TU45970 | lncRNA | downstream | 107829 | 1921838 ~ 1975630 (+) | True | G38758 |
| TU45971 | lncRNA | downstream | 111315 | 1925324 ~ 1928330 (+) | True | G38759 |
| TU45967 | lncRNA | downstream | 125971 | 1939980 ~ 1941750 (+) | True | G38756 |
| TU45974 | lncRNA | downstream | 127836 | 1941845 ~ 1966544 (+) | True | G38761 |
| TU46013 | lncRNA | downstream | 241642 | 2055651 ~ 2056825 (+) | True | G38796 |
| XM_034302861.1 | mRNA | upstream | 83 | 1784540 ~ 1806551 (+) | True | psip1a |
| XM_034302857.1 | mRNA | upstream | 83 | 1784668 ~ 1806551 (+) | False | psip1a |
| XM_034302860.1 | mRNA | upstream | 83 | 1784681 ~ 1806551 (+) | False | psip1a |
| XM_034302858.1 | mRNA | upstream | 83 | 1784803 ~ 1806551 (+) | False | psip1a |
| XM_034302859.1 | mRNA | upstream | 83 | 1784926 ~ 1806551 (+) | False | psip1a |
| XM_026911051.2 | mRNA | downstream | 8247 | 1822256 ~ 1847413 (+) | True | dnajb14 |
| XM_034302868.1 | mRNA | downstream | 34216 | 1848225 ~ 1853432 (+) | True | LOC117596857 |
| XM_026911055.2 | mRNA | downstream | 42512 | 1856521 ~ 1860800 (+) | True | LOC113524724 |
| XM_026911037.2 | mRNA | downstream | 50206 | 1864215 ~ 1872988 (+) | True | LOC113524707 |
| XM_026911048.2 | mRNA | downstream | 67321 | 1881330 ~ 1891816 (+) | True | si:ch211-113e8.10 |
| TU45743 | other | upstream | 637995 | 1166040 ~ 1168639 (+) | False | trmo |
| TU45723 | other | upstream | 677252 | 1102820 ~ 1129382 (+) | False | coro2a |
| TU45707 | other | upstream | 741303 | 1063972 ~ 1065331 (+) | True | G38577 |
| TU45582 | other | upstream | 1061650 | 722127 ~ 744984 (+) | False | mtap |
| XR_004577897.1 | other | upstream | 1117131 | 689114 ~ 689503 (+) | True | LOC117596906 |
| TU45964 | other | downstream | 169648 | 1983657 ~ 1997252 (+) | False | cdk2ap2 |
| TU45993 | other | downstream | 271456 | 2085465 ~ 2091306 (+) | False | stox2a |
| TU45994 | other | downstream | 271456 | 2085465 ~ 2090841 (+) | False | stox2a |
| TU45995 | other | downstream | 271456 | 2085465 ~ 2091221 (+) | False | stox2a |
| XR_004577910.1 | other | downstream | 351614 | 2165623 ~ 2165784 (+) | True | LOC113546173 |
