Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU45970 |
| length | 203 |
| lncRNA type | sense_over |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G38758 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 1921838 ~ 1975630 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU45903 | lncRNA | upstream | 107829 | 1806634 ~ 1814009 (+) | True | G38721 |
| TU45767 | lncRNA | upstream | 149061 | 1287572 ~ 1772777 (+) | False | G38608 |
| TU45890 | lncRNA | upstream | 157485 | 1763871 ~ 1764353 (+) | True | G38709 |
| TU45772 | lncRNA | upstream | 286871 | 1272968 ~ 1634967 (+) | False | G38608 |
| TU45865 | lncRNA | upstream | 400584 | 1498168 ~ 1521254 (+) | True | G38687 |
| TU46013 | lncRNA | downstream | 80021 | 2055651 ~ 2056825 (+) | True | G38796 |
| TU46037 | lncRNA | downstream | 147831 | 2123461 ~ 2124718 (+) | False | G38812 |
| TU46035 | lncRNA | downstream | 148440 | 2124070 ~ 2126667 (+) | True | G38812 |
| TU46052 | lncRNA | downstream | 189540 | 2165170 ~ 2165485 (+) | True | G38826 |
| TU46126 | lncRNA | downstream | 336021 | 2311651 ~ 2312451 (+) | True | G38895 |
| XM_034302869.1 | mRNA | upstream | 14186 | 1898791 ~ 1907652 (+) | True | cntf |
| XM_026911048.2 | mRNA | upstream | 30022 | 1881330 ~ 1891816 (+) | True | si:ch211-113e8.10 |
| XM_034302856.1 | mRNA | upstream | 30022 | 1881331 ~ 1891816 (+) | False | si:ch211-113e8.10 |
| XM_026911037.2 | mRNA | upstream | 48850 | 1864215 ~ 1872988 (+) | True | LOC113524707 |
| XM_026911055.2 | mRNA | upstream | 61038 | 1856521 ~ 1860800 (+) | True | LOC113524724 |
| XM_034302872.1 | mRNA | downstream | 8017 | 1983647 ~ 1997265 (+) | True | cdk2ap2 |
| XM_026932237.2 | mRNA | downstream | 39318 | 2014948 ~ 2018960 (+) | True | ing2 |
| XM_026941226.2 | mRNA | downstream | 49858 | 2025488 ~ 2091343 (+) | False | stox2a |
| XM_026941234.2 | mRNA | downstream | 72398 | 2048028 ~ 2091343 (+) | True | stox2a |
| XM_034302867.1 | mRNA | downstream | 133438 | 2109068 ~ 2118767 (+) | True | tmem134 |
| TU45743 | other | upstream | 753199 | 1166040 ~ 1168639 (+) | False | trmo |
| TU45723 | other | upstream | 792456 | 1102820 ~ 1129382 (+) | False | coro2a |
| TU45707 | other | upstream | 856507 | 1063972 ~ 1065331 (+) | True | G38577 |
| TU45582 | other | upstream | 1176854 | 722127 ~ 744984 (+) | False | mtap |
| XR_004577897.1 | other | upstream | 1232335 | 689114 ~ 689503 (+) | True | LOC117596906 |
| TU45964 | other | downstream | 8027 | 1983657 ~ 1997252 (+) | False | cdk2ap2 |
| TU45993 | other | downstream | 109835 | 2085465 ~ 2091306 (+) | False | stox2a |
| TU45994 | other | downstream | 109835 | 2085465 ~ 2090841 (+) | False | stox2a |
| TU45995 | other | downstream | 109835 | 2085465 ~ 2091221 (+) | False | stox2a |
| XR_004577910.1 | other | downstream | 189993 | 2165623 ~ 2165784 (+) | True | LOC113546173 |
