Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46693 |
| length | 864 |
| RNA type | TUCP |
| GC content | 0.54 |
| exon number | 5 |
| gene id | cntln |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 1270445 ~ 1369012 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46637 | lncRNA | downstream | 91331 | 1151146 ~ 1194477 (-) | True | G39359 |
| TU46670 | lncRNA | downstream | 114294 | 1170903 ~ 1171514 (-) | True | G39390 |
| TU46633 | lncRNA | downstream | 120458 | 1162650 ~ 1165350 (-) | False | G39356 |
| TU46634 | lncRNA | downstream | 120458 | 1162650 ~ 1165350 (-) | True | G39356 |
| TU46616 | lncRNA | downstream | 200355 | 1084439 ~ 1085453 (-) | True | G39346 |
| TU46703 | lncRNA | upstream | 2965 | 1292780 ~ 1294451 (-) | True | G39411 |
| TU46773 | lncRNA | upstream | 189664 | 1479479 ~ 1479890 (-) | True | G39476 |
| TU46781 | lncRNA | upstream | 200870 | 1490685 ~ 1493920 (-) | True | G39483 |
| TU46782 | lncRNA | upstream | 204806 | 1494621 ~ 1496066 (-) | True | G39484 |
| TU46824 | lncRNA | upstream | 265913 | 1555728 ~ 1556545 (-) | True | G39521 |
| XM_026910962.2 | mRNA | downstream | 132458 | 1146129 ~ 1153350 (-) | False | anp32b |
| XM_026910961.2 | mRNA | downstream | 132458 | 1146129 ~ 1153350 (-) | True | anp32b |
| XM_034301860.1 | mRNA | downstream | 215993 | 1065387 ~ 1069815 (-) | True | ints12 |
| XM_026910944.2 | mRNA | downstream | 278758 | 1004477 ~ 1007050 (-) | True | LOC113524614 |
| XM_026910937.2 | mRNA | downstream | 348359 | 925951 ~ 937449 (-) | True | ppa2 |
| XM_034302862.1 | mRNA | upstream | 520335 | 1810150 ~ 1820845 (-) | True | snapc3 |
| XM_026911038.2 | mRNA | upstream | 603771 | 1893586 ~ 1895099 (-) | True | si:ch211-113e8.11 |
| XM_026912185.2 | mRNA | upstream | 657560 | 1947375 ~ 1964907 (-) | False | ccdc149b |
| XM_026912184.2 | mRNA | upstream | 657560 | 1947375 ~ 1964907 (-) | True | ccdc149b |
| XM_026912183.2 | mRNA | upstream | 679948 | 1969763 ~ 1979549 (-) | True | lgi2b |
| TU46718 | other | downstream | 5473 | 1270541 ~ 1280335 (-) | False | cntln |
| TU45475 | other | downstream | 970280 | 314981 ~ 315528 (-) | True | G38400 |
| TU45455 | other | downstream | 1018009 | 263486 ~ 267799 (-) | False | LOC117596825 |
| TU45461 | other | downstream | 1024657 | 260769 ~ 261151 (-) | False | LOC117596825 |
| TU46700 | other | upstream | 3229 | 1293044 ~ 1301503 (-) | False | cntln |
| TU46918 | other | upstream | 582118 | 1871933 ~ 1877225 (-) | False | G39603 |
| TU46922 | other | upstream | 582118 | 1871933 ~ 1877225 (-) | False | G39603 |
| TU46930 | other | upstream | 582118 | 1871933 ~ 1877225 (-) | False | G39603 |
| TU46931 | other | upstream | 582118 | 1871933 ~ 1877583 (-) | True | G39603 |
