Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034302875.1 |
| length | 983 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 3 |
| gene id | LOC113545357 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 3831867 ~ 3834626 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47719 | lncRNA | upstream | 146753 | 3683343 ~ 3685205 (+) | True | G40287 |
| XR_004577906.1 | lncRNA | upstream | 306837 | 3515101 ~ 3525121 (+) | True | LOC117596918 |
| TU47566 | lncRNA | upstream | 306865 | 3515101 ~ 3525093 (+) | False | LOC117596918 |
| XR_004577844.1 | lncRNA | upstream | 428852 | 3400795 ~ 3403106 (+) | True | LOC117596855 |
| TU46198 | lncRNA | upstream | 1400871 | 2427812 ~ 2431087 (+) | True | G38962 |
| TU47821 | lncRNA | downstream | 30070 | 3864696 ~ 3865000 (+) | True | G40374 |
| TU48045 | lncRNA | downstream | 295489 | 4130115 ~ 4130322 (+) | True | G40586 |
| TU48049 | lncRNA | downstream | 392567 | 4227193 ~ 4227431 (+) | True | G40590 |
| TU48050 | lncRNA | downstream | 393556 | 4228182 ~ 4228548 (+) | True | G40591 |
| TU48051 | lncRNA | downstream | 394766 | 4229392 ~ 4229622 (+) | True | G40592 |
| XM_026933871.2 | mRNA | upstream | 26129 | 3802564 ~ 3805829 (+) | True | hand2 |
| XM_026944703.2 | mRNA | upstream | 119122 | 3700579 ~ 3712836 (+) | True | fbxo8 |
| XM_034302975.1 | mRNA | upstream | 163466 | 3644478 ~ 3668492 (+) | True | hpgd |
| XM_026944834.2 | mRNA | upstream | 190210 | 3575472 ~ 3641748 (+) | False | glra3 |
| XM_026944471.2 | mRNA | downstream | 4100 | 3838726 ~ 3840862 (+) | True | hmgb2a |
| XM_026942823.2 | mRNA | downstream | 648922 | 4483548 ~ 4487275 (+) | True | scpp1 |
| XM_026933138.2 | mRNA | downstream | 661006 | 4495632 ~ 4499516 (+) | False | tnip2 |
| XM_026933147.2 | mRNA | downstream | 661006 | 4495632 ~ 4499499 (+) | False | tnip2 |
| XM_026933131.2 | mRNA | downstream | 661008 | 4495634 ~ 4500384 (+) | True | tnip2 |
| XR_004577910.1 | other | upstream | 1666174 | 2165623 ~ 2165784 (+) | True | LOC113546173 |
| TU45993 | other | upstream | 1740652 | 2085465 ~ 2091306 (+) | False | stox2a |
| TU45995 | other | upstream | 1740737 | 2085465 ~ 2091221 (+) | False | stox2a |
| TU45994 | other | upstream | 1741117 | 2085465 ~ 2090841 (+) | False | stox2a |
| TU45964 | other | upstream | 1834706 | 1983657 ~ 1997252 (+) | False | cdk2ap2 |
| XR_003404319.2 | other | downstream | 1428956 | 5263582 ~ 5356697 (+) | False | znf827 |
| TU48562 | other | downstream | 1483908 | 5318534 ~ 5341750 (+) | True | G41047 |
| TU49753 | other | downstream | 3369324 | 7203950 ~ 7221023 (+) | True | G42075 |
| XR_003404394.2 | other | downstream | 3814572 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU50445 | other | downstream | 4631121 | 8465747 ~ 8466312 (+) | True | G42685 |
