Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47975 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.26 |
| exon number | 2 |
| gene id | G40522 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 3792229 ~ 3841160 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47763 | lncRNA | downstream | 98035 | 3702221 ~ 3712833 (-) | True | G40323 |
| TU47756 | lncRNA | downstream | 137057 | 3673150 ~ 3673811 (-) | True | G40316 |
| TU47755 | lncRNA | downstream | 138815 | 3668847 ~ 3672053 (-) | True | G40315 |
| TU47710 | lncRNA | downstream | 170488 | 3639764 ~ 3640380 (-) | True | G40278 |
| TU47679 | lncRNA | downstream | 303362 | 3502831 ~ 3507506 (-) | True | G40250 |
| XR_004577552.1 | lncRNA | upstream | 647386 | 4488546 ~ 4496696 (-) | True | LOC117596430 |
| TU48257 | lncRNA | upstream | 696899 | 4538059 ~ 4539526 (-) | True | G40770 |
| TU48440 | lncRNA | upstream | 824362 | 4665522 ~ 4665725 (-) | True | G40936 |
| TU48442 | lncRNA | upstream | 826046 | 4667206 ~ 4668993 (-) | True | G40938 |
| TU48466 | lncRNA | upstream | 898224 | 4739384 ~ 4739711 (-) | True | G40962 |
| XM_026931975.2 | mRNA | downstream | 111348 | 3683443 ~ 3699520 (-) | False | cep44 |
| XM_034302839.1 | mRNA | upstream | 2319 | 3843479 ~ 3869764 (-) | True | galnt7 |
| XM_034302840.1 | mRNA | upstream | 2319 | 3843479 ~ 3869764 (-) | False | galnt7 |
| XM_026933253.2 | mRNA | upstream | 36030 | 3877190 ~ 4089517 (-) | True | galntl6 |
| XM_026933264.2 | mRNA | upstream | 51376 | 3892536 ~ 4089518 (-) | False | galntl6 |
| XM_034302098.1 | mRNA | upstream | 51524 | 3892684 ~ 4089518 (-) | False | galntl6 |
| trnah-gug_3 | other | downstream | 776315 | 3034482 ~ 3034553 (-) | True | trnah-gug_3 |
| trnah-gug_2 | other | downstream | 776931 | 3033866 ~ 3033937 (-) | True | trnah-gug_2 |
| trnae-uuc | other | downstream | 778065 | 3032732 ~ 3032803 (-) | True | trnae-uuc |
| TU47094 | other | downstream | 1637117 | 2173358 ~ 2173751 (-) | True | G39720 |
| TU46993 | other | downstream | 1831337 | 1977326 ~ 1979531 (-) | False | lgi2b |
| XR_004577883.1 | other | upstream | 704424 | 4545584 ~ 4609450 (-) | False | dclk2a |
| TU48529 | other | upstream | 1362546 | 5203706 ~ 5227923 (-) | False | lsm6 |
| TU48528 | other | upstream | 1383870 | 5225030 ~ 5227923 (-) | False | lsm6 |
| XR_004577821.1 | other | upstream | 1915551 | 5756711 ~ 5819513 (-) | False | gab1 |
| XR_004577908.1 | other | upstream | 3320314 | 7161474 ~ 7204151 (-) | False | lef1 |
