Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48545 |
| length | 399 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G41032 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 5270315 ~ 5322391 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48544 | lncRNA | upstream | 120 | 5264901 ~ 5270195 (+) | True | G41031 |
| TU48526 | lncRNA | upstream | 43887 | 5224948 ~ 5226428 (+) | True | G41019 |
| XR_004577893.1 | lncRNA | upstream | 47540 | 5219493 ~ 5222775 (+) | True | LOC117596903 |
| TU48521 | lncRNA | upstream | 139929 | 5130120 ~ 5130386 (+) | True | G41015 |
| TU48512 | lncRNA | upstream | 190454 | 5079299 ~ 5079861 (+) | True | G41006 |
| TU48564 | lncRNA | downstream | 10993 | 5333384 ~ 5335565 (+) | True | G41049 |
| TU48780 | lncRNA | downstream | 496157 | 5818548 ~ 5819447 (+) | True | G41232 |
| TU48872 | lncRNA | downstream | 553757 | 5876148 ~ 5876422 (+) | True | G41299 |
| TU48876 | lncRNA | downstream | 895074 | 6217465 ~ 6228351 (+) | False | inpp4b |
| XR_004577767.1 | lncRNA | downstream | 916976 | 6239367 ~ 6262431 (+) | True | LOC117596795 |
| XM_034302684.1 | mRNA | upstream | 377936 | 4882996 ~ 4892379 (+) | True | prmt9 |
| XM_034302686.1 | mRNA | upstream | 377936 | 4882996 ~ 4892379 (+) | False | prmt9 |
| XM_034302685.1 | mRNA | upstream | 377936 | 4882996 ~ 4892379 (+) | False | prmt9 |
| XM_034302676.1 | mRNA | upstream | 498711 | 4664316 ~ 4771604 (+) | True | nr3c2 |
| XM_026937146.2 | mRNA | downstream | 277494 | 5599885 ~ 5626477 (+) | False | si:dkey-27h10.2 |
| XM_034302752.1 | mRNA | downstream | 277494 | 5599885 ~ 5620916 (+) | True | si:dkey-27h10.2 |
| XM_026937136.2 | mRNA | downstream | 314476 | 5636867 ~ 5674128 (+) | True | frem3 |
| XM_026942811.2 | mRNA | downstream | 354789 | 5677180 ~ 5689962 (+) | True | LOC113544150 |
| XM_026940088.2 | mRNA | downstream | 374815 | 5697206 ~ 5716038 (+) | True | LOC113542501 |
| TU47789 | other | upstream | 1435704 | 3831949 ~ 3834611 (+) | False | LOC113545357 |
| XR_004577910.1 | other | upstream | 3104531 | 2165623 ~ 2165784 (+) | True | LOC113546173 |
| TU45993 | other | upstream | 3179009 | 2085465 ~ 2091306 (+) | False | stox2a |
| TU49753 | other | downstream | 1881559 | 7203950 ~ 7221023 (+) | True | G42075 |
| XR_003404394.2 | other | downstream | 2326807 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU50445 | other | downstream | 3143356 | 8465747 ~ 8466312 (+) | True | G42685 |
| trnak-cuu | other | downstream | 3147233 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| TU52056 | other | downstream | 5229868 | 10552259 ~ 10558295 (+) | True | sprn |
