Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU49614 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G41944 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 7012093 ~ 7012306 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49606 | lncRNA | downstream | 70635 | 6941240 ~ 6941458 (-) | True | G41938 |
| TU49467 | lncRNA | downstream | 214473 | 6794579 ~ 6797620 (-) | True | G41809 |
| TU49415 | lncRNA | downstream | 331820 | 6677130 ~ 6680273 (-) | True | G41768 |
| TU49367 | lncRNA | downstream | 473543 | 6535704 ~ 6538550 (-) | True | G41731 |
| TU49177 | lncRNA | downstream | 640227 | 6371655 ~ 6371866 (-) | True | G41563 |
| TU49679 | lncRNA | upstream | 4459 | 7016765 ~ 7017405 (-) | True | G42008 |
| XR_004577839.1 | lncRNA | upstream | 128793 | 7141099 ~ 7142302 (-) | True | LOC117596848 |
| TU49878 | lncRNA | upstream | 301362 | 7313668 ~ 7315596 (-) | True | G42173 |
| TU49892 | lncRNA | upstream | 330161 | 7342467 ~ 7342681 (-) | True | G42179 |
| TU50043 | lncRNA | upstream | 424136 | 7436442 ~ 7438889 (-) | True | G42315 |
| XM_026938804.2 | mRNA | downstream | 6059 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_026938779.2 | mRNA | downstream | 6059 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_026938811.2 | mRNA | downstream | 6059 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_026938787.2 | mRNA | downstream | 6059 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_034302826.1 | mRNA | downstream | 6059 | 6942697 ~ 7006034 (-) | False | npnta |
| XM_034302824.1 | mRNA | upstream | 5151 | 7017457 ~ 7119620 (-) | True | gstcd |
| XM_026933042.2 | mRNA | upstream | 149168 | 7161474 ~ 7204699 (-) | False | lef1 |
| XM_026933026.2 | mRNA | upstream | 149168 | 7161474 ~ 7204699 (-) | True | lef1 |
| XM_026933034.2 | mRNA | upstream | 149168 | 7161474 ~ 7204151 (-) | False | lef1 |
| XM_026934409.2 | mRNA | upstream | 306793 | 7319099 ~ 7324522 (-) | True | LOC113538928 |
| XR_004577821.1 | other | downstream | 1192580 | 5756711 ~ 5819513 (-) | False | gab1 |
| TU48529 | other | downstream | 1784170 | 5203706 ~ 5227923 (-) | False | lsm6 |
| TU48528 | other | downstream | 1784170 | 5225030 ~ 5227923 (-) | False | lsm6 |
| XR_004577883.1 | other | downstream | 2402643 | 4545584 ~ 4609450 (-) | False | dclk2a |
| trnah-gug_3 | other | downstream | 3977540 | 3034482 ~ 3034553 (-) | True | trnah-gug_3 |
| XR_004577908.1 | other | upstream | 149168 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577909.1 | other | upstream | 149168 | 7161474 ~ 7204151 (-) | False | lef1 |
| trnam-cau_1 | other | upstream | 1454678 | 8466984 ~ 8467055 (-) | True | trnam-cau_1 |
| trnam-cau_2 | other | upstream | 1455730 | 8468036 ~ 8468107 (-) | True | trnam-cau_2 |
| trnam-cau_3 | other | upstream | 1456765 | 8469071 ~ 8469142 (-) | True | trnam-cau_3 |
