Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU50091 |
| length | 815 |
| lncRNA type | read_through |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G42361 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 7568371 ~ 7652220 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50045 | lncRNA | downstream | 129135 | 7439038 ~ 7439236 (-) | False | maml3 |
| TU50043 | lncRNA | downstream | 129482 | 7436442 ~ 7438889 (-) | True | G42315 |
| TU49892 | lncRNA | downstream | 225690 | 7342467 ~ 7342681 (-) | True | G42179 |
| TU49878 | lncRNA | downstream | 252775 | 7313668 ~ 7315596 (-) | True | G42173 |
| XR_004577839.1 | lncRNA | downstream | 426069 | 7141099 ~ 7142302 (-) | True | LOC117596848 |
| TU50124 | lncRNA | upstream | 19367 | 7671587 ~ 7672864 (-) | True | G42391 |
| TU50125 | lncRNA | upstream | 23268 | 7675488 ~ 7675772 (-) | True | G42392 |
| TU50127 | lncRNA | upstream | 24877 | 7677097 ~ 7678737 (-) | False | G42394 |
| TU50130 | lncRNA | upstream | 24877 | 7677097 ~ 7678945 (-) | True | G42394 |
| TU50131 | lncRNA | upstream | 28600 | 7680820 ~ 7681430 (-) | True | G42395 |
| XM_026941281.2 | mRNA | downstream | 184208 | 7361915 ~ 7384163 (-) | False | si:ch211-113e8.3 |
| XM_026941297.2 | mRNA | downstream | 184208 | 7361915 ~ 7384163 (-) | False | si:ch211-113e8.3 |
| XM_026941290.2 | mRNA | downstream | 184208 | 7361915 ~ 7384163 (-) | True | si:ch211-113e8.3 |
| XM_034302880.1 | mRNA | downstream | 229940 | 7332429 ~ 7338431 (-) | False | LOC113542008 |
| XM_034302881.1 | mRNA | downstream | 238295 | 7326874 ~ 7330076 (-) | False | LOC113542008 |
| XM_026941398.2 | mRNA | upstream | 50432 | 7702652 ~ 7715901 (-) | True | zgc:153642 |
| XM_026943612.2 | mRNA | upstream | 170910 | 7823130 ~ 7825476 (-) | True | hmx4 |
| XM_026943559.2 | mRNA | upstream | 174414 | 7826634 ~ 7829546 (-) | True | hmx1 |
| XM_026942712.2 | mRNA | upstream | 255008 | 7907228 ~ 7909974 (-) | True | adra2c |
| XM_034301237.1 | mRNA | upstream | 401274 | 8053494 ~ 8069324 (-) | True | LOC117596360 |
| XR_004577908.1 | other | downstream | 364220 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577909.1 | other | downstream | 364220 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577821.1 | other | downstream | 1748858 | 5756711 ~ 5819513 (-) | False | gab1 |
| TU48529 | other | downstream | 2340448 | 5203706 ~ 5227923 (-) | False | lsm6 |
| trnam-cau_1 | other | upstream | 814764 | 8466984 ~ 8467055 (-) | True | trnam-cau_1 |
| trnam-cau_2 | other | upstream | 815816 | 8468036 ~ 8468107 (-) | True | trnam-cau_2 |
| trnam-cau_3 | other | upstream | 816851 | 8469071 ~ 8469142 (-) | True | trnam-cau_3 |
| trnam-cau_4 | other | upstream | 817766 | 8469986 ~ 8470057 (-) | True | trnam-cau_4 |
| trnae-cuc_7 | other | upstream | 818138 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
