Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU50125 |
| length | 285 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G42392 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 7675488 ~ 7675772 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50124 | lncRNA | downstream | 2624 | 7671587 ~ 7672864 (-) | True | G42391 |
| TU50091 | lncRNA | downstream | 23268 | 7568371 ~ 7652220 (-) | True | G42361 |
| TU50045 | lncRNA | downstream | 236252 | 7439038 ~ 7439236 (-) | False | maml3 |
| TU50043 | lncRNA | downstream | 236599 | 7436442 ~ 7438889 (-) | True | G42315 |
| TU49892 | lncRNA | downstream | 332807 | 7342467 ~ 7342681 (-) | True | G42179 |
| TU50127 | lncRNA | upstream | 1325 | 7677097 ~ 7678737 (-) | False | G42394 |
| TU50130 | lncRNA | upstream | 1325 | 7677097 ~ 7678945 (-) | True | G42394 |
| TU50131 | lncRNA | upstream | 5048 | 7680820 ~ 7681430 (-) | True | G42395 |
| TU50133 | lncRNA | upstream | 11525 | 7687297 ~ 7687689 (-) | True | G42397 |
| TU50136 | lncRNA | upstream | 14939 | 7690711 ~ 7691027 (-) | True | G42400 |
| XM_026941317.2 | mRNA | downstream | 29413 | 7630169 ~ 7646075 (-) | False | clgn |
| XM_026941308.2 | mRNA | downstream | 29459 | 7630169 ~ 7646029 (-) | False | clgn |
| XM_034302632.1 | mRNA | downstream | 30585 | 7630169 ~ 7644903 (-) | True | clgn |
| XM_026941246.2 | mRNA | downstream | 85825 | 7438904 ~ 7589663 (-) | True | maml3 |
| XM_026941281.2 | mRNA | downstream | 291325 | 7361915 ~ 7384163 (-) | False | si:ch211-113e8.3 |
| XM_026941398.2 | mRNA | upstream | 26880 | 7702652 ~ 7715901 (-) | True | zgc:153642 |
| XM_026943612.2 | mRNA | upstream | 147358 | 7823130 ~ 7825476 (-) | True | hmx4 |
| XM_026943559.2 | mRNA | upstream | 150862 | 7826634 ~ 7829546 (-) | True | hmx1 |
| XM_026942712.2 | mRNA | upstream | 231456 | 7907228 ~ 7909974 (-) | True | adra2c |
| XM_034301237.1 | mRNA | upstream | 377722 | 8053494 ~ 8069324 (-) | True | LOC117596360 |
| XR_004577908.1 | other | downstream | 471337 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577909.1 | other | downstream | 471337 | 7161474 ~ 7204151 (-) | False | lef1 |
| XR_004577821.1 | other | downstream | 1855975 | 5756711 ~ 5819513 (-) | False | gab1 |
| TU48529 | other | downstream | 2447565 | 5203706 ~ 5227923 (-) | False | lsm6 |
| trnam-cau_1 | other | upstream | 791212 | 8466984 ~ 8467055 (-) | True | trnam-cau_1 |
| trnam-cau_2 | other | upstream | 792264 | 8468036 ~ 8468107 (-) | True | trnam-cau_2 |
| trnam-cau_3 | other | upstream | 793299 | 8469071 ~ 8469142 (-) | True | trnam-cau_3 |
| trnam-cau_4 | other | upstream | 794214 | 8469986 ~ 8470057 (-) | True | trnam-cau_4 |
| trnae-cuc_7 | other | upstream | 794586 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
