Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026933661.2 |
| length | 590 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | sf3b5 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 9224876 ~ 9228884 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50882 | lncRNA | downstream | 207240 | 9016202 ~ 9017636 (-) | True | G43029 |
| TU50844 | lncRNA | downstream | 363368 | 8857258 ~ 8861508 (-) | True | G42994 |
| TU50831 | lncRNA | downstream | 455690 | 8767988 ~ 8769186 (-) | True | G42987 |
| TU50814 | lncRNA | downstream | 469980 | 8754151 ~ 8754896 (-) | True | G42970 |
| TU50741 | lncRNA | downstream | 673521 | 8551130 ~ 8551355 (-) | True | G42914 |
| TU51072 | lncRNA | upstream | 88635 | 9317428 ~ 9341922 (-) | True | G43198 |
| TU51168 | lncRNA | upstream | 153915 | 9382708 ~ 9412002 (-) | True | G43270 |
| TU51261 | lncRNA | upstream | 287918 | 9516711 ~ 9517005 (-) | True | G43352 |
| TU51431 | lncRNA | upstream | 299723 | 9528516 ~ 9528727 (-) | True | G43509 |
| TU51505 | lncRNA | upstream | 530683 | 9759476 ~ 9760212 (-) | True | G43569 |
| XM_026942296.2 | mRNA | downstream | 76168 | 9144255 ~ 9148708 (-) | True | agt |
| XM_026940775.2 | mRNA | downstream | 95818 | 9097987 ~ 9129058 (-) | True | pgbd5 |
| XM_026934827.2 | mRNA | downstream | 272128 | 8946682 ~ 8952748 (-) | True | LOC113539201 |
| XM_034303001.1 | mRNA | downstream | 298539 | 8909505 ~ 8926337 (-) | False | cabp2a |
| XM_026932135.2 | mRNA | upstream | 15748 | 9244541 ~ 9268345 (-) | True | oprm1 |
| XM_026944059.2 | mRNA | upstream | 121267 | 9350060 ~ 9379729 (-) | True | pcnx2 |
| XM_034303158.1 | mRNA | upstream | 180277 | 9409070 ~ 9458592 (-) | False | il22ra2 |
| XM_026945186.2 | mRNA | upstream | 180283 | 9409076 ~ 9458592 (-) | False | il22ra2 |
| XM_026945175.2 | mRNA | upstream | 180283 | 9409076 ~ 9458592 (-) | False | il22ra2 |
| TU50809 | other | downstream | 371082 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 371082 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 441078 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 754447 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnam-cau_4 | other | downstream | 754819 | 8469986 ~ 8470057 (-) | True | trnam-cau_4 |
| trnag-gcc_1 | other | upstream | 2479821 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 2916102 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 3295843 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 3302650 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 3403020 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
