Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51058 |
| length | 1127 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G43186 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 9344055 ~ 9347236 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50999 | lncRNA | upstream | 119462 | 9224363 ~ 9224593 (+) | True | G43137 |
| TU50649 | lncRNA | upstream | 329014 | 9012486 ~ 9015041 (+) | True | G42848 |
| TU50628 | lncRNA | upstream | 390029 | 8953522 ~ 8954026 (+) | True | G42833 |
| TU50585 | lncRNA | upstream | 473129 | 8812836 ~ 8870926 (+) | True | G42792 |
| TU50573 | lncRNA | upstream | 572992 | 8769324 ~ 8771063 (+) | True | G42783 |
| TU51055 | lncRNA | downstream | 249 | 9345430 ~ 9347236 (+) | True | G43186 |
| TU51239 | lncRNA | downstream | 143578 | 9488759 ~ 9488959 (+) | True | G43330 |
| TU51246 | lncRNA | downstream | 149796 | 9494977 ~ 9495210 (+) | True | G43337 |
| TU51269 | lncRNA | downstream | 181680 | 9526861 ~ 9527159 (+) | True | G43360 |
| TU51332 | lncRNA | downstream | 323430 | 9668611 ~ 9671740 (+) | True | G43422 |
| XM_026933348.2 | mRNA | upstream | 5439 | 9316791 ~ 9338616 (+) | True | rgs17 |
| XM_026938999.2 | mRNA | upstream | 132762 | 9152330 ~ 9211293 (+) | False | phactr2 |
| XM_026942835.2 | mRNA | downstream | 37457 | 9382638 ~ 9408518 (+) | True | map3k21 |
| XM_026945162.2 | mRNA | downstream | 75885 | 9421066 ~ 9487539 (+) | True | prim2 |
| XM_026938626.2 | mRNA | downstream | 298628 | 9643809 ~ 9666593 (+) | True | si:dkey-103j14.5 |
| XM_026944483.2 | mRNA | downstream | 394609 | 9739790 ~ 9745528 (+) | True | kifbp |
| XM_034302989.1 | mRNA | downstream | 418452 | 9763633 ~ 9772357 (+) | True | vps26a |
| trnak-cuu | other | upstream | 874359 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| TU50445 | other | upstream | 877743 | 8465747 ~ 8466312 (+) | True | G42685 |
| XR_003404394.2 | other | upstream | 1678022 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU49753 | other | upstream | 2123032 | 7203950 ~ 7221023 (+) | True | G42075 |
| TU48562 | other | upstream | 4002305 | 5318534 ~ 5341750 (+) | True | G41047 |
| TU52056 | other | downstream | 1207078 | 10552259 ~ 10558295 (+) | True | sprn |
| XR_004577889.1 | other | downstream | 1249393 | 10594574 ~ 10608704 (+) | False | LOC113543929 |
| XR_004577793.1 | other | downstream | 1754412 | 11099593 ~ 11171114 (+) | False | dntt |
| trnag-ccc | other | downstream | 2246154 | 11591335 ~ 11591405 (+) | True | trnag-ccc |
| XR_003404598.2 | other | downstream | 2337683 | 11682864 ~ 11726772 (+) | False | LOC113545306 |
