Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51269 |
| length | 299 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G43360 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 9526861 ~ 9527159 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51246 | lncRNA | upstream | 31651 | 9494977 ~ 9495210 (+) | True | G43337 |
| TU51239 | lncRNA | upstream | 37902 | 9488759 ~ 9488959 (+) | True | G43330 |
| TU51055 | lncRNA | upstream | 179625 | 9345430 ~ 9347236 (+) | True | G43186 |
| TU51058 | lncRNA | upstream | 181680 | 9344055 ~ 9345181 (+) | False | G43186 |
| TU50999 | lncRNA | upstream | 302268 | 9224363 ~ 9224593 (+) | True | G43137 |
| TU51332 | lncRNA | downstream | 141452 | 9668611 ~ 9671740 (+) | True | G43422 |
| TU51561 | lncRNA | downstream | 344387 | 9871546 ~ 9871819 (+) | True | G43615 |
| TU51592 | lncRNA | downstream | 532367 | 10059526 ~ 10077649 (+) | False | G43646 |
| TU51598 | lncRNA | downstream | 544008 | 10071167 ~ 10072098 (+) | True | G43651 |
| TU51593 | lncRNA | downstream | 547023 | 10074182 ~ 10077649 (+) | True | G43646 |
| XM_026945162.2 | mRNA | upstream | 39322 | 9421066 ~ 9487539 (+) | True | prim2 |
| XM_026942835.2 | mRNA | upstream | 118343 | 9382638 ~ 9408518 (+) | True | map3k21 |
| XM_026933348.2 | mRNA | upstream | 188245 | 9316791 ~ 9338616 (+) | True | rgs17 |
| XM_026939016.2 | mRNA | upstream | 315568 | 9177221 ~ 9211293 (+) | False | phactr2 |
| XM_026938626.2 | mRNA | downstream | 116650 | 9643809 ~ 9666593 (+) | True | si:dkey-103j14.5 |
| XM_026944483.2 | mRNA | downstream | 212631 | 9739790 ~ 9745528 (+) | True | kifbp |
| XM_034302989.1 | mRNA | downstream | 236474 | 9763633 ~ 9772357 (+) | True | vps26a |
| XM_034302919.1 | mRNA | downstream | 246773 | 9773932 ~ 9783035 (+) | False | supv3l1 |
| XM_026939583.2 | mRNA | downstream | 247189 | 9774348 ~ 9783035 (+) | True | supv3l1 |
| trnak-cuu | other | upstream | 1057165 | 8469624 ~ 8469696 (+) | False | trnak-cuu |
| TU50445 | other | upstream | 1060549 | 8465747 ~ 8466312 (+) | True | G42685 |
| XR_003404394.2 | other | upstream | 1860828 | 7649198 ~ 7666033 (+) | False | naa15b |
| TU49753 | other | upstream | 2305838 | 7203950 ~ 7221023 (+) | True | G42075 |
| TU48562 | other | upstream | 4185111 | 5318534 ~ 5341750 (+) | True | G41047 |
| TU52056 | other | downstream | 1025100 | 10552259 ~ 10558295 (+) | True | sprn |
| XR_004577889.1 | other | downstream | 1067415 | 10594574 ~ 10608704 (+) | False | LOC113543929 |
| XR_004577793.1 | other | downstream | 1572434 | 11099593 ~ 11171114 (+) | False | dntt |
| trnag-ccc | other | downstream | 2064176 | 11591335 ~ 11591405 (+) | True | trnag-ccc |
| XR_003404598.2 | other | downstream | 2155705 | 11682864 ~ 11726772 (+) | False | LOC113545306 |
