Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51431 |
| length | 212 |
| lncRNA type | intronic |
| GC content | 0.30 |
| exon number | 1 |
| gene id | G43509 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 9528516 ~ 9528727 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51261 | lncRNA | downstream | 11511 | 9516711 ~ 9517005 (-) | True | G43352 |
| TU51168 | lncRNA | downstream | 116514 | 9382708 ~ 9412002 (-) | True | G43270 |
| TU51072 | lncRNA | downstream | 186594 | 9317428 ~ 9341922 (-) | True | G43198 |
| TU50882 | lncRNA | downstream | 510880 | 9016202 ~ 9017636 (-) | True | G43029 |
| TU50844 | lncRNA | downstream | 667008 | 8857258 ~ 8861508 (-) | True | G42994 |
| TU51505 | lncRNA | upstream | 230749 | 9759476 ~ 9760212 (-) | True | G43569 |
| TU51522 | lncRNA | upstream | 232517 | 9761244 ~ 9761467 (-) | True | G43586 |
| TU51523 | lncRNA | upstream | 232886 | 9761613 ~ 9761812 (-) | True | G43587 |
| TU51524 | lncRNA | upstream | 233570 | 9762297 ~ 9762556 (-) | True | G43588 |
| XR_003404277.2 | lncRNA | upstream | 253938 | 9782665 ~ 9806230 (-) | True | LOC113542224 |
| XM_034303158.1 | mRNA | downstream | 69924 | 9409070 ~ 9458592 (-) | False | il22ra2 |
| XM_026945186.2 | mRNA | downstream | 69924 | 9409076 ~ 9458592 (-) | False | il22ra2 |
| XM_026945175.2 | mRNA | downstream | 69924 | 9409076 ~ 9458592 (-) | False | il22ra2 |
| XM_026945200.2 | mRNA | downstream | 69962 | 9409076 ~ 9458554 (-) | False | il22ra2 |
| XM_026945192.2 | mRNA | downstream | 114619 | 9409076 ~ 9413897 (-) | True | il22ra2 |
| XM_026934453.2 | mRNA | upstream | 1443 | 9530170 ~ 9630009 (-) | False | khdrbs2 |
| XM_026934421.2 | mRNA | upstream | 1443 | 9530170 ~ 9630009 (-) | False | khdrbs2 |
| XM_026934445.2 | mRNA | upstream | 1443 | 9530170 ~ 9630009 (-) | False | khdrbs2 |
| XM_026934461.2 | mRNA | upstream | 19070 | 9547797 ~ 9630009 (-) | False | khdrbs2 |
| XM_026934438.2 | mRNA | upstream | 19070 | 9547797 ~ 9630009 (-) | True | khdrbs2 |
| TU51003 | other | downstream | 299632 | 9224881 ~ 9228884 (-) | True | sf3b5 |
| TU50809 | other | downstream | 674722 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 674722 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 744718 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 1058087 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnag-gcc_1 | other | upstream | 2179887 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 2616168 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 2995909 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 3002716 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 3103086 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
