Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51505 |
| length | 737 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G43569 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 9759476 ~ 9760212 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51431 | lncRNA | downstream | 230749 | 9528516 ~ 9528727 (-) | True | G43509 |
| TU51261 | lncRNA | downstream | 242471 | 9516711 ~ 9517005 (-) | True | G43352 |
| TU51168 | lncRNA | downstream | 347474 | 9382708 ~ 9412002 (-) | True | G43270 |
| TU51072 | lncRNA | downstream | 417554 | 9317428 ~ 9341922 (-) | True | G43198 |
| TU50882 | lncRNA | downstream | 741840 | 9016202 ~ 9017636 (-) | True | G43029 |
| TU51522 | lncRNA | upstream | 1032 | 9761244 ~ 9761467 (-) | True | G43586 |
| TU51523 | lncRNA | upstream | 1401 | 9761613 ~ 9761812 (-) | True | G43587 |
| TU51524 | lncRNA | upstream | 2085 | 9762297 ~ 9762556 (-) | True | G43588 |
| XR_003404277.2 | lncRNA | upstream | 22453 | 9782665 ~ 9806230 (-) | True | LOC113542224 |
| TU51675 | lncRNA | upstream | 152439 | 9912651 ~ 9912875 (-) | True | G43722 |
| XM_026944230.2 | mRNA | downstream | 24269 | 9723581 ~ 9735207 (-) | True | pik3ap1 |
| XM_026944122.2 | mRNA | downstream | 39558 | 9668721 ~ 9719918 (-) | True | LOC113544990 |
| XM_026944090.2 | mRNA | downstream | 39580 | 9668721 ~ 9719896 (-) | False | LOC113544990 |
| XM_034303187.1 | mRNA | downstream | 39583 | 9668721 ~ 9719893 (-) | False | LOC113544990 |
| XM_034303188.1 | mRNA | downstream | 39583 | 9668721 ~ 9719893 (-) | False | LOC113544990 |
| XM_026942068.2 | mRNA | upstream | 56076 | 9816288 ~ 9828253 (-) | False | tacr2 |
| XM_026942060.2 | mRNA | upstream | 56076 | 9816288 ~ 9828253 (-) | True | tacr2 |
| XM_026934239.2 | mRNA | upstream | 137025 | 9897237 ~ 9902912 (-) | True | hnrnph3 |
| XM_026939846.2 | mRNA | upstream | 184028 | 9944240 ~ 9959459 (-) | False | nfkb2 |
| XM_026939857.2 | mRNA | upstream | 184028 | 9944240 ~ 9955032 (-) | True | nfkb2 |
| TU51003 | other | downstream | 530592 | 9224881 ~ 9228884 (-) | True | sf3b5 |
| TU50809 | other | downstream | 905682 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 905682 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 975678 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 1289047 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnag-gcc_1 | other | upstream | 1948402 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 2384683 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 2764424 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 2771231 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 2871601 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
