Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51524 |
| length | 260 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G43588 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 9762297 ~ 9762556 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51523 | lncRNA | downstream | 485 | 9761613 ~ 9761812 (-) | True | G43587 |
| TU51522 | lncRNA | downstream | 830 | 9761244 ~ 9761467 (-) | True | G43586 |
| TU51505 | lncRNA | downstream | 2085 | 9759476 ~ 9760212 (-) | True | G43569 |
| TU51431 | lncRNA | downstream | 233570 | 9528516 ~ 9528727 (-) | True | G43509 |
| TU51261 | lncRNA | downstream | 245292 | 9516711 ~ 9517005 (-) | True | G43352 |
| XR_003404277.2 | lncRNA | upstream | 20109 | 9782665 ~ 9806230 (-) | True | LOC113542224 |
| TU51675 | lncRNA | upstream | 150095 | 9912651 ~ 9912875 (-) | True | G43722 |
| TU51676 | lncRNA | upstream | 150784 | 9913340 ~ 9913709 (-) | True | G43723 |
| TU51677 | lncRNA | upstream | 152029 | 9914585 ~ 9914978 (-) | True | G43724 |
| TU51678 | lncRNA | upstream | 152635 | 9915191 ~ 9915802 (-) | True | G43725 |
| XM_026944230.2 | mRNA | downstream | 27090 | 9723581 ~ 9735207 (-) | True | pik3ap1 |
| XM_034303187.1 | mRNA | downstream | 42404 | 9668721 ~ 9719893 (-) | False | LOC113544990 |
| XM_026942068.2 | mRNA | upstream | 53732 | 9816288 ~ 9828253 (-) | False | tacr2 |
| XM_026942060.2 | mRNA | upstream | 53732 | 9816288 ~ 9828253 (-) | True | tacr2 |
| XM_026934239.2 | mRNA | upstream | 134681 | 9897237 ~ 9902912 (-) | True | hnrnph3 |
| XM_026939846.2 | mRNA | upstream | 181684 | 9944240 ~ 9959459 (-) | False | nfkb2 |
| XM_026939857.2 | mRNA | upstream | 181684 | 9944240 ~ 9955032 (-) | True | nfkb2 |
| TU51003 | other | downstream | 533413 | 9224881 ~ 9228884 (-) | True | sf3b5 |
| TU50809 | other | downstream | 908503 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 908503 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 978499 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 1291868 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnag-gcc_1 | other | upstream | 1946058 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 2382339 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 2762080 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 2768887 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 2869257 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
