Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51743 |
| length | 201 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G43779 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 10026269 ~ 10026469 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51710 | lncRNA | downstream | 2227 | 10021567 ~ 10024042 (-) | True | G43752 |
| TU51739 | lncRNA | downstream | 9241 | 10016418 ~ 10017028 (-) | True | G43775 |
| TU51701 | lncRNA | downstream | 17708 | 9999984 ~ 10008561 (-) | True | sncga |
| TU51702 | lncRNA | downstream | 17820 | 9999959 ~ 10008449 (-) | False | sncga |
| TU51681 | lncRNA | downstream | 106069 | 9919975 ~ 9920200 (-) | True | G43728 |
| TU51745 | lncRNA | upstream | 1135 | 10027604 ~ 10027815 (-) | True | G43781 |
| TU51746 | lncRNA | upstream | 1942 | 10028411 ~ 10029209 (-) | True | G43782 |
| TU51707 | lncRNA | upstream | 4099 | 10030568 ~ 10032075 (-) | True | G43749 |
| TU51751 | lncRNA | upstream | 89466 | 10115935 ~ 10116716 (-) | True | G43787 |
| TU51754 | lncRNA | upstream | 100945 | 10127414 ~ 10127631 (-) | True | G43790 |
| XM_026944892.2 | mRNA | downstream | 17734 | 9999991 ~ 10008535 (-) | False | sncga |
| XM_026933400.2 | mRNA | downstream | 29624 | 9994621 ~ 9996645 (-) | True | zgc:193505 |
| XM_034302933.1 | mRNA | downstream | 49853 | 9961961 ~ 9976416 (-) | True | shld2 |
| XM_034302934.1 | mRNA | downstream | 50258 | 9961960 ~ 9976011 (-) | False | shld2 |
| XM_034302697.1 | mRNA | upstream | 9019 | 10035488 ~ 10072123 (-) | True | bmpr1aa |
| XM_034302698.1 | mRNA | upstream | 9019 | 10035488 ~ 10060452 (-) | False | bmpr1aa |
| XM_034302190.1 | mRNA | upstream | 49820 | 10076289 ~ 10128979 (-) | False | ldb3a |
| XM_034302186.1 | mRNA | upstream | 49820 | 10076289 ~ 10123059 (-) | False | ldb3a |
| XM_026945320.2 | mRNA | upstream | 49820 | 10076289 ~ 10122981 (-) | False | ldb3a |
| TU51003 | other | downstream | 797385 | 9224881 ~ 9228884 (-) | True | sf3b5 |
| TU50809 | other | downstream | 1172475 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 1172475 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 1242471 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 1555840 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnag-gcc_1 | other | upstream | 1682145 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 2118426 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 2498167 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 2504974 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 2605344 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
