Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU51751 |
| length | 584 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G43787 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 10115935 ~ 10116716 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51707 | lncRNA | downstream | 83860 | 10030568 ~ 10032075 (-) | True | G43749 |
| TU51746 | lncRNA | downstream | 86726 | 10028411 ~ 10029209 (-) | True | G43782 |
| TU51745 | lncRNA | downstream | 88120 | 10027604 ~ 10027815 (-) | True | G43781 |
| TU51743 | lncRNA | downstream | 89466 | 10026269 ~ 10026469 (-) | True | G43779 |
| TU51710 | lncRNA | downstream | 91893 | 10021567 ~ 10024042 (-) | True | G43752 |
| TU51754 | lncRNA | upstream | 10698 | 10127414 ~ 10127631 (-) | True | G43790 |
| TU51773 | lncRNA | upstream | 42213 | 10158929 ~ 10161502 (-) | True | opn4a |
| TU51888 | lncRNA | upstream | 125225 | 10241941 ~ 10242882 (-) | True | G43910 |
| TU51966 | lncRNA | upstream | 137008 | 10253724 ~ 10253938 (-) | True | G43978 |
| TU51974 | lncRNA | upstream | 148640 | 10265356 ~ 10265588 (-) | True | G43981 |
| XM_034302697.1 | mRNA | downstream | 43812 | 10035488 ~ 10072123 (-) | True | bmpr1aa |
| XM_034302698.1 | mRNA | downstream | 55483 | 10035488 ~ 10060452 (-) | False | bmpr1aa |
| XM_026944892.2 | mRNA | downstream | 107400 | 9999991 ~ 10008535 (-) | False | sncga |
| XM_026933400.2 | mRNA | downstream | 119290 | 9994621 ~ 9996645 (-) | True | zgc:193505 |
| XM_034302933.1 | mRNA | downstream | 139519 | 9961961 ~ 9976416 (-) | True | shld2 |
| XM_034303063.1 | mRNA | upstream | 19594 | 10136310 ~ 10161523 (-) | False | opn4a |
| XM_026942424.2 | mRNA | upstream | 19594 | 10136310 ~ 10161523 (-) | False | opn4a |
| XM_026942432.2 | mRNA | upstream | 19594 | 10136310 ~ 10161523 (-) | False | opn4a |
| XM_034303064.1 | mRNA | upstream | 19594 | 10136310 ~ 10152599 (-) | False | opn4a |
| XM_034302776.1 | mRNA | upstream | 49002 | 10165718 ~ 10233081 (-) | True | usp54a |
| TU51003 | other | downstream | 887051 | 9224881 ~ 9228884 (-) | True | sf3b5 |
| TU50809 | other | downstream | 1262141 | 8801243 ~ 8853794 (-) | True | G42967 |
| TU50810 | other | downstream | 1262141 | 8849109 ~ 8853794 (-) | False | G42967 |
| XR_003403913.2 | other | downstream | 1332137 | 8755869 ~ 8783798 (-) | False | zdhhc5a |
| trnae-cuc_7 | other | downstream | 1645506 | 8470358 ~ 8470429 (-) | True | trnae-cuc_7 |
| trnag-gcc_1 | other | upstream | 1591898 | 11708614 ~ 11708684 (-) | True | trnag-gcc_1 |
| TU53378 | other | upstream | 2028179 | 12144895 ~ 12152506 (-) | False | tmem254 |
| TU53492 | other | upstream | 2407920 | 12524636 ~ 12534075 (-) | False | LOC113537616 |
| TU53486 | other | upstream | 2414727 | 12531443 ~ 12534075 (-) | False | LOC113537616 |
| TU53537 | other | upstream | 2515097 | 12631813 ~ 12633015 (-) | False | LOC113539135 |
